Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is qor [H]

Identifier: 86606010

GI number: 86606010

Start: 1348335

End: 1349336

Strand: Reverse

Name: qor [H]

Synonym: CYA_1334

Alternate gene names: 86606010

Gene position: 1349336-1348335 (Counterclockwise)

Preceding gene: 86606013

Following gene: 86606009

Centisome position: 46.01

GC content: 64.77

Gene sequence:

>1002_bases
ATGAAAGCCATCCTCATGAGCGTGCCGGGTGGGCCGGAGGTTTTGCAACTGCAGGAGGTGCCCGACCCGCAGATTCGCGG
CGAGCGGGAGCTGCGTGTCCGCCTCAAGGCCGCCGGCGTCAACCCCATCGACACCAAGCTGCGGCGGCGAGGCACCTTCT
ACCCCGAGGAGATGCCGGCCATTTTGGGATGCGATGGCGCCGGCGTTGTAGAAGCCGTGGGATCTGGGGTCAGGCAGTTT
CGGGTTGGGGACGAAGTTTACTTCTGCCACGGCGGCCTGGGCAGAGAGGCGGGGAACTACGCCGAGCTAATCGTGGTCGA
TGAGCGCTTCGTCGCTCCCAAGCCCAGAACCCTCAGCTTTGCCGAGGCTGCCGCCGCTCCCCTGGTGCTGATCACCGCCT
GGGAAGCCCTCTACGACCGGGGACGGCTGCAGGCCGGCCAAAAGGTGCTCATCCACGCCGGGGCAGGGGGTGTTGGCCAT
GTGGCCGTCCAACTGGCCCGTCTGCGGGGATGCCAAGTGGCTACCACCGTGAGCACGCCGGAAAAGGCCGAGTTTGTCCG
TTTGCTGGGGGCCAGCTTGCCCATCTTCTATCGCCAGACCGACTTTGTGCGGGCCGTTCTGGATTGGACGGAGGAGGAGG
GAGTGGATCTTGCTCTCGATACCCTTGGCGGCCCAGTGCTGGAGCAGACCTTCCCTGCCGTGCGCGTGTACGGCGATCTC
GTGACCCTGCTGGCGCCAGCTCCAGAGACCGATTGGCGGGTGGCCCGCGACCGCAACTTGCGAGTGAGCTTTGAGCTGAT
GCTCACCCCTATGCTGAAGAACCTCATCGTTGCTCGGCAAAACCAGGCGGAGATCCTCCGGCAGTGCGCCCGCCTCATCG
ACCAGGGCCAACTGCGCATCCGGCTCAGCCACACCTTTCCCCTGGCCGAAGCGGCTGCCGCTCACCGGCTGCTGGAACAG
GGATCCGTTTTGGGCAAAATTGCCTTAACCATCTCCGACTAG

Upstream 100 bases:

>100_bases
TAACCATTGTTCAGAGACCCCCTTGCCGGTGTATCCTCAGGAGCGCGGCGGCAATCGCGGGGCAGCAAGTCGAGCAAACC
GAGCCTGAACACTTGAGAAG

Downstream 100 bases:

>100_bases
GCATGCTGGAGGAGGCCCTGCCCAGATCCGAGTCTATGGCCGCTCCCCTCACCCCTCACCTGTTGGAGAACGAGAGCTTC
TACGAGAATGCCCTCTGCTG

Product: zinc-binding dehydrogenase family oxidoreductase

Products: NA

Alternate protein names: NADPH:quinone reductase [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKAILMSVPGGPEVLQLQEVPDPQIRGERELRVRLKAAGVNPIDTKLRRRGTFYPEEMPAILGCDGAGVVEAVGSGVRQF
RVGDEVYFCHGGLGREAGNYAELIVVDERFVAPKPRTLSFAEAAAAPLVLITAWEALYDRGRLQAGQKVLIHAGAGGVGH
VAVQLARLRGCQVATTVSTPEKAEFVRLLGASLPIFYRQTDFVRAVLDWTEEEGVDLALDTLGGPVLEQTFPAVRVYGDL
VTLLAPAPETDWRVARDRNLRVSFELMLTPMLKNLIVARQNQAEILRQCARLIDQGQLRIRLSHTFPLAEAAAAHRLLEQ
GSVLGKIALTISD

Sequences:

>Translated_333_residues
MKAILMSVPGGPEVLQLQEVPDPQIRGERELRVRLKAAGVNPIDTKLRRRGTFYPEEMPAILGCDGAGVVEAVGSGVRQF
RVGDEVYFCHGGLGREAGNYAELIVVDERFVAPKPRTLSFAEAAAAPLVLITAWEALYDRGRLQAGQKVLIHAGAGGVGH
VAVQLARLRGCQVATTVSTPEKAEFVRLLGASLPIFYRQTDFVRAVLDWTEEEGVDLALDTLGGPVLEQTFPAVRVYGDL
VTLLAPAPETDWRVARDRNLRVSFELMLTPMLKNLIVARQNQAEILRQCARLIDQGQLRIRLSHTFPLAEAAAAHRLLEQ
GSVLGKIALTISD
>Mature_333_residues
MKAILMSVPGGPEVLQLQEVPDPQIRGERELRVRLKAAGVNPIDTKLRRRGTFYPEEMPAILGCDGAGVVEAVGSGVRQF
RVGDEVYFCHGGLGREAGNYAELIVVDERFVAPKPRTLSFAEAAAAPLVLITAWEALYDRGRLQAGQKVLIHAGAGGVGH
VAVQLARLRGCQVATTVSTPEKAEFVRLLGASLPIFYRQTDFVRAVLDWTEEEGVDLALDTLGGPVLEQTFPAVRVYGDL
VTLLAPAPETDWRVARDRNLRVSFELMLTPMLKNLIVARQNQAEILRQCARLIDQGQLRIRLSHTFPLAEAAAAHRLLEQ
GSVLGKIALTISD

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=344, Percent_Identity=29.6511627906977, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI22538444, Length=344, Percent_Identity=29.6511627906977, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI194239674, Length=337, Percent_Identity=28.486646884273, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI13236495, Length=337, Percent_Identity=28.486646884273, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI24308257, Length=228, Percent_Identity=33.7719298245614, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI18379349, Length=315, Percent_Identity=29.5238095238095, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI47519420, Length=359, Percent_Identity=28.133704735376, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI194239676, Length=210, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI28557745, Length=232, Percent_Identity=31.8965517241379, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI41872631, Length=247, Percent_Identity=29.1497975708502, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI90669511, Length=327, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI67078404, Length=178, Percent_Identity=29.2134831460674, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1790485, Length=321, Percent_Identity=32.0872274143302, Blast_Score=132, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17507255, Length=191, Percent_Identity=34.5549738219895, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71987554, Length=195, Percent_Identity=34.8717948717949, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI212642053, Length=237, Percent_Identity=30.379746835443, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6319520, Length=338, Percent_Identity=28.9940828402367, Blast_Score=121, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6323961, Length=272, Percent_Identity=26.8382352941176, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324486, Length=259, Percent_Identity=26.6409266409266, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI19920632, Length=254, Percent_Identity=27.9527559055118, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI221330659, Length=254, Percent_Identity=27.9527559055118, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24581345, Length=231, Percent_Identity=25.5411255411255, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR002364 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.6.5.5 [H]

Molecular weight: Translated: 36328; Mature: 36328

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS01162 QOR_ZETA_CRYSTAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAILMSVPGGPEVLQLQEVPDPQIRGERELRVRLKAAGVNPIDTKLRRRGTFYPEEMPA
CCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCE
ILGCDGAGVVEAVGSGVRQFRVGDEVYFCHGGLGREAGNYAELIVVDERFVAPKPRTLSF
EEECCCCHHHHHHHCCHHEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCH
AEAAAAPLVLITAWEALYDRGRLQAGQKVLIHAGAGGVGHVAVQLARLRGCQVATTVSTP
HHHHCCCEEEEHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCC
EKAEFVRLLGASLPIFYRQTDFVRAVLDWTEEEGVDLALDTLGGPVLEQTFPAVRVYGDL
HHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCEEEEHHCCCHHHHHHCCHHHHHHHH
VTLLAPAPETDWRVARDRNLRVSFELMLTPMLKNLIVARQNQAEILRQCARLIDQGQLRI
HHHHCCCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE
RLSHTFPLAEAAAAHRLLEQGSVLGKIALTISD
EEECCCCHHHHHHHHHHHHCCCEEEEEEEEECC
>Mature Secondary Structure
MKAILMSVPGGPEVLQLQEVPDPQIRGERELRVRLKAAGVNPIDTKLRRRGTFYPEEMPA
CCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCE
ILGCDGAGVVEAVGSGVRQFRVGDEVYFCHGGLGREAGNYAELIVVDERFVAPKPRTLSF
EEECCCCHHHHHHHCCHHEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCH
AEAAAAPLVLITAWEALYDRGRLQAGQKVLIHAGAGGVGHVAVQLARLRGCQVATTVSTP
HHHHCCCEEEEHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCC
EKAEFVRLLGASLPIFYRQTDFVRAVLDWTEEEGVDLALDTLGGPVLEQTFPAVRVYGDL
HHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCEEEEHHCCCHHHHHHCCHHHHHHHH
VTLLAPAPETDWRVARDRNLRVSFELMLTPMLKNLIVARQNQAEILRQCARLIDQGQLRI
HHHHCCCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE
RLSHTFPLAEAAAAHRLLEQGSVLGKIALTISD
EEECCCCHHHHHHHHHHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]