| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606009
Identifier: 86606009
GI number: 86606009
Start: 1347730
End: 1348299
Strand: Reverse
Name: 86606009
Synonym: CYA_1333
Alternate gene names: NA
Gene position: 1348299-1347730 (Counterclockwise)
Preceding gene: 86606010
Following gene: 86606008
Centisome position: 45.97
GC content: 61.4
Gene sequence:
>570_bases ATGGCCGCTCCCCTCACCCCTCACCTGTTGGAGAACGAGAGCTTCTACGAGAATGCCCTCTGCTGGCTAGGGCGACCGCA GACGGCCTATCGGCTGCTGAGCGAGGCGGTTTTTCCGGCCATCTCCTCTTGGGTGCGGGGAGAGGTGGACAGCTACTCCT TCAATCACTGGCAGCCGGAGGACGTGCGCACCTTTCTCTACCCGGTGGTGGCTCTGGGAGACCAGGAGACCCTTGTTCTC GCCAGCGAGGCCCTGCTCCTCTGCGGCAGTGGCAACTACTACAACCCCTGTGACTTGGCCATTGTGGTCTTCGTGCAGCA GCCCCAAGAGCTGTTCAGCCAACTGATGCAGCGCATCCGCCGCGCCGAGGCCATCATCACCCGCGGGCCGGAGGTGCGCA TGCTCTCTGAACAGGTGAGCCTGGCCAAGCGGGGGCGAGACTACATCAACACTAAGTATCTGGTCTGGCCCTACGCCCTC TCTGCTGCTGCTCAAGATACTTTGGTTAAACAGGGGATCAGCATTATCCGTCTTTCACCGCAAGCGGCCGCCCTGCCCTT GGGAGACTAA
Upstream 100 bases:
>100_bases CCGCTCACCGGCTGCTGGAACAGGGATCCGTTTTGGGCAAAATTGCCTTAACCATCTCCGACTAGGCATGCTGGAGGAGG CCCTGCCCAGATCCGAGTCT
Downstream 100 bases:
>100_bases GCTGAGGGCAATTTGGAGGAAAATGGGGATCCCTGACTTTTCCGTCTCCATCTTTATGGCCGATGCCCACCTGCCGCCGC TAATCCAAGCGATGTTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MAAPLTPHLLENESFYENALCWLGRPQTAYRLLSEAVFPAISSWVRGEVDSYSFNHWQPEDVRTFLYPVVALGDQETLVL ASEALLLCGSGNYYNPCDLAIVVFVQQPQELFSQLMQRIRRAEAIITRGPEVRMLSEQVSLAKRGRDYINTKYLVWPYAL SAAAQDTLVKQGISIIRLSPQAAALPLGD
Sequences:
>Translated_189_residues MAAPLTPHLLENESFYENALCWLGRPQTAYRLLSEAVFPAISSWVRGEVDSYSFNHWQPEDVRTFLYPVVALGDQETLVL ASEALLLCGSGNYYNPCDLAIVVFVQQPQELFSQLMQRIRRAEAIITRGPEVRMLSEQVSLAKRGRDYINTKYLVWPYAL SAAAQDTLVKQGISIIRLSPQAAALPLGD >Mature_188_residues AAPLTPHLLENESFYENALCWLGRPQTAYRLLSEAVFPAISSWVRGEVDSYSFNHWQPEDVRTFLYPVVALGDQETLVLA SEALLLCGSGNYYNPCDLAIVVFVQQPQELFSQLMQRIRRAEAIITRGPEVRMLSEQVSLAKRGRDYINTKYLVWPYALS AAAQDTLVKQGISIIRLSPQAAALPLGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21191; Mature: 21059
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPLTPHLLENESFYENALCWLGRPQTAYRLLSEAVFPAISSWVRGEVDSYSFNHWQPE CCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH DVRTFLYPVVALGDQETLVLASEALLLCGSGNYYNPCDLAIVVFVQQPQELFSQLMQRIR HHHHHHHHHHHCCCCCEEEEEECEEEEECCCCCCCCHHEEEEEEECCHHHHHHHHHHHHH RAEAIITRGPEVRMLSEQVSLAKRGRDYINTKYLVWPYALSAAAQDTLVKQGISIIRLSP HHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCEEEEEHHHHHHHHHHHHHHCCCEEEEECC QAAALPLGD CCCCCCCCC >Mature Secondary Structure AAPLTPHLLENESFYENALCWLGRPQTAYRLLSEAVFPAISSWVRGEVDSYSFNHWQPE CCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH DVRTFLYPVVALGDQETLVLASEALLLCGSGNYYNPCDLAIVVFVQQPQELFSQLMQRIR HHHHHHHHHHHCCCCCEEEEEECEEEEECCCCCCCCHHEEEEEEECCHHHHHHHHHHHHH RAEAIITRGPEVRMLSEQVSLAKRGRDYINTKYLVWPYALSAAAQDTLVKQGISIIRLSP HHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCEEEEEHHHHHHHHHHHHHHCCCEEEEECC QAAALPLGD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA