| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605990
Identifier: 86605990
GI number: 86605990
Start: 1319466
End: 1319630
Strand: Reverse
Name: 86605990
Synonym: CYA_1309
Alternate gene names: NA
Gene position: 1319630-1319466 (Counterclockwise)
Preceding gene: 86605991
Following gene: 86605989
Centisome position: 45.0
GC content: 67.88
Gene sequence:
>165_bases TTGGCCCGCCTCACTCTGCCAGCGTACCGCTCGCCAGCCCACCAGGGACGAGAGGCCTGTTCGCAAGCCCTGGGGGGGTT GGTGCGGTTGTCAGAAGAGGCGGTTTTGGTGCCTGCTGTAGCCTCTGGGCCAGCGAGGGCAAACGGCGGCTCGCTGCGCT GCTGA
Upstream 100 bases:
>100_bases GAGACGGCTCCACCGCCAGCGGGGGGAGAGCGGGCCCGGCCCGCCTTGAACTGGAAGGGATCCCGGCCAATTTTCCCGGG CAGGGTATTTCAACGGCGGA
Downstream 100 bases:
>100_bases GCTCTTCTCAAAGGGAGGTTTGGCCGATGGGCAAAGAGAAATTGGCTTTTGACCAACCAGTCTTCTAAAGTTCTATGGTT GCTTGGACTTTTCTCCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 53
Protein sequence:
>54_residues MARLTLPAYRSPAHQGREACSQALGGLVRLSEEAVLVPAVASGPARANGGSLRC
Sequences:
>Translated_54_residues MARLTLPAYRSPAHQGREACSQALGGLVRLSEEAVLVPAVASGPARANGGSLRC >Mature_53_residues ARLTLPAYRSPAHQGREACSQALGGLVRLSEEAVLVPAVASGPARANGGSLRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5517; Mature: 5386
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLTLPAYRSPAHQGREACSQALGGLVRLSEEAVLVPAVASGPARANGGSLRC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure ARLTLPAYRSPAHQGREACSQALGGLVRLSEEAVLVPAVASGPARANGGSLRC CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA