| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is ordL [H]
Identifier: 86605989
GI number: 86605989
Start: 1318030
End: 1319391
Strand: Reverse
Name: ordL [H]
Synonym: CYA_1308
Alternate gene names: 86605989
Gene position: 1319391-1318030 (Counterclockwise)
Preceding gene: 86605990
Following gene: 86605988
Centisome position: 44.99
GC content: 65.79
Gene sequence:
>1362_bases ATGGTTGCTTGGACTTTTCTCCCGAAGACAAATCCTTATCCTCCCAAAACCTACGATCCTGCTTACCCAGTCGGCAGCTA CTGGGACAGCACAATACCAGATTCCAGTTGGCGACATCCGGCGCCTCTGCAAGGGCAGGTTGAGGCCGAGGTGGCCATCA TAGGAGGAGGATTGACGGGGCTATCGACGGCCCTGCACCTGGCCCGCGATCACGGCATCTCGGCTTGCCTGCTGGAGGCG GGATCCCTGGGCTGGGGCGCCTCTGGGCGCAACGGCGGCTTCTGCGGAGTGGGGGCGAGCTACCTCACCCATGCCCAAAT GGTGCGGCGGGTAGGCCTGGCGGAGACGGAGCGCTACTACCGGGATCAGCGGCAGGCGGTGGAGACCGTGCAAGAGCTGG CCGCTGCCGAGGGCTTTTCCCTGGATGCCCAGGGAGAAGGTTGGTACGCAGTAGCCCACCGCCCCAGCGCTTGGCGGGAG TTGGAGGCCGAATACCAGATCTACGCCCAGGTGGCCGGCTACCCAGTTCAGCTCCTCAGCCCCAAAGAGCTGCGGGAACG GGGCTTCGACAGCCGCGAGAACCACGGCGCCCTCCACATCGGGGTGGGGTTTGGCCTCAACCCCCTCAAGCTTGCCCAAG GGCTGGCCCAGGCCGCCCAGAAATGGGGAGCGCAATTGCACAGCGCCAGCCGGGTCGTTGCCTGGGAAAAGGTTGGCTCC CGCCACCTTTGCCATACGCCCGGGGGAACGGTGCGGGCACGGCACCTGGTCATCGCCACCAATGGCTACACGCCGGCCAA CCTCTACCCCCAATTGGCCGGATCCCTGTTGCCGGTGCTTTCCAACATTCTGGTCACCCGGCCTCTGACGCCGGCAGAGC GAAGGGCTCAGGGCTGGTGGGATCCGACGCCGATCTACGACACGCGACGGCTGCTGTTCTACTACCGTCTCCTGCCGGAT GGGCGCTTGCTGTTTGGGGGGCGGGACGGCACCTGCGATGCCCCAAGGGAACGCCAGCGCCTGCGGGCCTGGATGGCGCG GCAGCTCTACCGCCTCTTTCCCGCCTGGGAGGGGGTGGAGATCGAGTACGCCTGGAACGGCTTGGTTTGCCTCTCCCGCC AGCTTCACCCCCACATCGGCCCTTCGCCGACGGATCCCAGCCTCTGGTACGGCCTGGCCTACCACGGCAGCGGCGTGGCC ACAGGGGTGTGGGCAGGCAAAATCCTGGCCCAGGAGATCGCCGGCATCCGACCCCAAATTAGCGCCCTCTTCCGCCAGCC ACCGCGCCTTTTCCCTTTCCCCTGGCTGCGGCTTCACTACCTGCGGCTGGGGTATCTTTGGTGGCAGTTGACAGACGGAT AG
Upstream 100 bases:
>100_bases CAAACGGCGGCTCGCTGCGCTGCTGAGCTCTTCTCAAAGGGAGGTTTGGCCGATGGGCAAAGAGAAATTGGCTTTTGACC AACCAGTCTTCTAAAGTTCT
Downstream 100 bases:
>100_bases TTCCTTCAGGTGTGCGGGAGAGCCCCCTATTCGCTGCAGAAGTCCTGTCGTAATCTAGTCCTAGTTCGGCCTTGCCTTGG CCTCTCGCCATTGCCCGTCG
Product: oxidoreductase, FAD-dependent
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MVAWTFLPKTNPYPPKTYDPAYPVGSYWDSTIPDSSWRHPAPLQGQVEAEVAIIGGGLTGLSTALHLARDHGISACLLEA GSLGWGASGRNGGFCGVGASYLTHAQMVRRVGLAETERYYRDQRQAVETVQELAAAEGFSLDAQGEGWYAVAHRPSAWRE LEAEYQIYAQVAGYPVQLLSPKELRERGFDSRENHGALHIGVGFGLNPLKLAQGLAQAAQKWGAQLHSASRVVAWEKVGS RHLCHTPGGTVRARHLVIATNGYTPANLYPQLAGSLLPVLSNILVTRPLTPAERRAQGWWDPTPIYDTRRLLFYYRLLPD GRLLFGGRDGTCDAPRERQRLRAWMARQLYRLFPAWEGVEIEYAWNGLVCLSRQLHPHIGPSPTDPSLWYGLAYHGSGVA TGVWAGKILAQEIAGIRPQISALFRQPPRLFPFPWLRLHYLRLGYLWWQLTDG
Sequences:
>Translated_453_residues MVAWTFLPKTNPYPPKTYDPAYPVGSYWDSTIPDSSWRHPAPLQGQVEAEVAIIGGGLTGLSTALHLARDHGISACLLEA GSLGWGASGRNGGFCGVGASYLTHAQMVRRVGLAETERYYRDQRQAVETVQELAAAEGFSLDAQGEGWYAVAHRPSAWRE LEAEYQIYAQVAGYPVQLLSPKELRERGFDSRENHGALHIGVGFGLNPLKLAQGLAQAAQKWGAQLHSASRVVAWEKVGS RHLCHTPGGTVRARHLVIATNGYTPANLYPQLAGSLLPVLSNILVTRPLTPAERRAQGWWDPTPIYDTRRLLFYYRLLPD GRLLFGGRDGTCDAPRERQRLRAWMARQLYRLFPAWEGVEIEYAWNGLVCLSRQLHPHIGPSPTDPSLWYGLAYHGSGVA TGVWAGKILAQEIAGIRPQISALFRQPPRLFPFPWLRLHYLRLGYLWWQLTDG >Mature_453_residues MVAWTFLPKTNPYPPKTYDPAYPVGSYWDSTIPDSSWRHPAPLQGQVEAEVAIIGGGLTGLSTALHLARDHGISACLLEA GSLGWGASGRNGGFCGVGASYLTHAQMVRRVGLAETERYYRDQRQAVETVQELAAAEGFSLDAQGEGWYAVAHRPSAWRE LEAEYQIYAQVAGYPVQLLSPKELRERGFDSRENHGALHIGVGFGLNPLKLAQGLAQAAQKWGAQLHSASRVVAWEKVGS RHLCHTPGGTVRARHLVIATNGYTPANLYPQLAGSLLPVLSNILVTRPLTPAERRAQGWWDPTPIYDTRRLLFYYRLLPD GRLLFGGRDGTCDAPRERQRLRAWMARQLYRLFPAWEGVEIEYAWNGLVCLSRQLHPHIGPSPTDPSLWYGLAYHGSGVA TGVWAGKILAQEIAGIRPQISALFRQPPRLFPFPWLRLHYLRLGYLWWQLTDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=414, Percent_Identity=28.743961352657, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 50386; Mature: 50386
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAWTFLPKTNPYPPKTYDPAYPVGSYWDSTIPDSSWRHPAPLQGQVEAEVAIIGGGLTG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHH LSTALHLARDHGISACLLEAGSLGWGASGRNGGFCGVGASYLTHAQMVRRVGLAETERYY HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCHHHHHHHH RDQRQAVETVQELAAAEGFSLDAQGEGWYAVAHRPSAWRELEAEYQIYAQVAGYPVQLLS HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEEEHHCCCCEEECC PKELRERGFDSRENHGALHIGVGFGLNPLKLAQGLAQAAQKWGAQLHSASRVVAWEKVGS HHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCC RHLCHTPGGTVRARHLVIATNGYTPANLYPQLAGSLLPVLSNILVTRPLTPAERRAQGWW CCEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC DPTPIYDTRRLLFYYRLLPDGRLLFGGRDGTCDAPRERQRLRAWMARQLYRLFPAWEGVE CCCCCHHHHHHHHHHEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE IEYAWNGLVCLSRQLHPHIGPSPTDPSLWYGLAYHGSGVATGVWAGKILAQEIAGIRPQI EEEECCCCEEEHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH SALFRQPPRLFPFPWLRLHYLRLGYLWWQLTDG HHHHCCCCCCCCCHHHHHHHHHHEEEEEEEECC >Mature Secondary Structure MVAWTFLPKTNPYPPKTYDPAYPVGSYWDSTIPDSSWRHPAPLQGQVEAEVAIIGGGLTG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHH LSTALHLARDHGISACLLEAGSLGWGASGRNGGFCGVGASYLTHAQMVRRVGLAETERYY HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCHHHHHHHH RDQRQAVETVQELAAAEGFSLDAQGEGWYAVAHRPSAWRELEAEYQIYAQVAGYPVQLLS HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEEEHHCCCCEEECC PKELRERGFDSRENHGALHIGVGFGLNPLKLAQGLAQAAQKWGAQLHSASRVVAWEKVGS HHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCC RHLCHTPGGTVRARHLVIATNGYTPANLYPQLAGSLLPVLSNILVTRPLTPAERRAQGWW CCEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC DPTPIYDTRRLLFYYRLLPDGRLLFGGRDGTCDAPRERQRLRAWMARQLYRLFPAWEGVE CCCCCHHHHHHHHHHEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE IEYAWNGLVCLSRQLHPHIGPSPTDPSLWYGLAYHGSGVATGVWAGKILAQEIAGIRPQI EEEECCCCEEEHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH SALFRQPPRLFPFPWLRLHYLRLGYLWWQLTDG HHHHCCCCCCCCCHHHHHHHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430; 10400573 [H]