| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605976
Identifier: 86605976
GI number: 86605976
Start: 1305333
End: 1305617
Strand: Reverse
Name: 86605976
Synonym: CYA_1295
Alternate gene names: NA
Gene position: 1305617-1305333 (Counterclockwise)
Preceding gene: 86605979
Following gene: 86605972
Centisome position: 44.52
GC content: 60.35
Gene sequence:
>285_bases TTGCCGTTCATGCTACCTACTGTCGACTACGAGCGGCGAGACATCCAAGTGCCACTCTCGTGCATCCCCGTTGCCGCCCG GGCCTTGATCCGGCAGGGGGTATCCGTCTGCTGGCGGGAAGAAAGCCTGTCTGCCCTAATTCGTCTGGGATCCAAAGGAG CCGCCGACCGAGCCGCCATTCTGCTGGTGGAAATGAGCCTCATGGGCCAACCGGAAGAGCTAAAAAACTGGCTGGAGATG TGCTGGCAACTGCCCGCTTGTCTCAGGGAACCGCTGCAGGTGTAG
Upstream 100 bases:
>100_bases AGAACTCTACAAAGTTTACAAAAGATCACTTCATACTTTGCAAAGACCCGTGACAGACAAGCGAAAAGGGAAGAAGATTA AGACATAATAAAGATTTGGG
Downstream 100 bases:
>100_bases GATAAAGGATCACTGCAGTTCAAGAGCCTGTCTCGTCGAGGAGAAACTGGCTGCCGTAGCCGGTAACGATGCGGGTTCCA TCTTTGAGGATATGAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MPFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKNWLEM CWQLPACLREPLQV
Sequences:
>Translated_94_residues MPFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKNWLEM CWQLPACLREPLQV >Mature_93_residues PFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKNWLEMC WQLPACLREPLQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10610; Mature: 10479
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLVEMSLMGQPEELKNWLEMCWQLPACLREPLQV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLVEMSLMGQPEELKNWLEMCWQLPACLREPLQV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA