Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605976

Identifier: 86605976

GI number: 86605976

Start: 1305333

End: 1305617

Strand: Reverse

Name: 86605976

Synonym: CYA_1295

Alternate gene names: NA

Gene position: 1305617-1305333 (Counterclockwise)

Preceding gene: 86605979

Following gene: 86605972

Centisome position: 44.52

GC content: 60.35

Gene sequence:

>285_bases
TTGCCGTTCATGCTACCTACTGTCGACTACGAGCGGCGAGACATCCAAGTGCCACTCTCGTGCATCCCCGTTGCCGCCCG
GGCCTTGATCCGGCAGGGGGTATCCGTCTGCTGGCGGGAAGAAAGCCTGTCTGCCCTAATTCGTCTGGGATCCAAAGGAG
CCGCCGACCGAGCCGCCATTCTGCTGGTGGAAATGAGCCTCATGGGCCAACCGGAAGAGCTAAAAAACTGGCTGGAGATG
TGCTGGCAACTGCCCGCTTGTCTCAGGGAACCGCTGCAGGTGTAG

Upstream 100 bases:

>100_bases
AGAACTCTACAAAGTTTACAAAAGATCACTTCATACTTTGCAAAGACCCGTGACAGACAAGCGAAAAGGGAAGAAGATTA
AGACATAATAAAGATTTGGG

Downstream 100 bases:

>100_bases
GATAAAGGATCACTGCAGTTCAAGAGCCTGTCTCGTCGAGGAGAAACTGGCTGCCGTAGCCGGTAACGATGCGGGTTCCA
TCTTTGAGGATATGAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MPFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKNWLEM
CWQLPACLREPLQV

Sequences:

>Translated_94_residues
MPFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKNWLEM
CWQLPACLREPLQV
>Mature_93_residues
PFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKNWLEMC
WQLPACLREPLQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10610; Mature: 10479

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LLVEMSLMGQPEELKNWLEMCWQLPACLREPLQV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFMLPTVDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LLVEMSLMGQPEELKNWLEMCWQLPACLREPLQV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA