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The map label for this gene is aapJ [H]

Identifier: 86605966

GI number: 86605966

Start: 1294588

End: 1295625

Strand: Reverse

Name: aapJ [H]

Synonym: CYA_1284

Alternate gene names: 86605966

Gene position: 1295625-1294588 (Counterclockwise)

Preceding gene: 86605968

Following gene: 86605965

Centisome position: 44.18

GC content: 60.02

Gene sequence:

>1038_bases
ATGAACTGGATAAAGCATTTGAACGGATTGGCTCCCTTGGCCGGGGCACTGGCGTTGTCTATGGGCCTGCAGTCCCTTCC
CGCTTGGGCGCAGCTGGGGCCGCTCACCGACCGCATCAAGGCTCGGGGCGAGTTGATCTGTGGGGTAAACAACCAACTGC
CCGGATTCGGCAACCTGGATGACCAAGGCAAGTATGTGGGTTTTGATATCGACATCTGCCGGGCAGTAGCTGCCGCTCTC
TTTGGAGATCCGGACAAGGTTCGATACGTCTACCTGACGGCGGCCAATCGCCAGTCTGCGATTCAGTCGGGCGAGGTCGA
TATGATTAGCCGCAACACCACCTGGACCCTCACCCGGGATCGCGAGTGGGCGGTGACCTTCGGCCCCACCACCTACTACG
ACGGCCAAGGATTTATGGTGCGGAAGTCGCTGGGGGTGGAAAAGCTGGAAGACCTGAACGGGGCCACCATCTGTGTGATT
GCCGGCACCACCACTGAGCTGAACTTGGCGGATACCTTCCGCGCCCGTGGCATTGCCTTTACGCCAGTAACCTTCGACGG
CGATGATTCCTCTTTCAACGCCTACGAAGAGGGCCGTTGCGATGCCATCACCAGCGACCAAAGCGCCCTCATCTCCCGCC
GGGCCAGCTTGGCTTCTCCCGACGACCACGTGATCTTGCCGGAGGTGATCTCCAAAGAGCCCTTGGGGCCGCTGGTTCCC
CACGGAGATGAGAGTTTCTCCGACATTATGAACTGGACGGTCTACGCCCTCTTCTATGCAGAAGAAAAGGGGATCACCAG
CGCCAATGTGGACGAGTTCCTCAAGTCGGAGGATCCCGACATTCGCCGCTTCTTGGGCCAGGAAGGCAACCTGGGAGAGC
TGCTGGGCCTGAAGCCGGATTGGGTGGTCAATGTCATCAAGGCGGTGGGCAACTACGGCGAGATCTTCAACCGCCACCTG
ACCCCCTTGGGCGTGCCGCGGGGCTTGAACCAGCCCTACACCAAAGGTGGGATCCAGTACGCGCCGCCTTTCCGCTAA

Upstream 100 bases:

>100_bases
TGGCAGGAGTGTAACCCAATGGCACGGTATCTCGGTTGAAGTGCCGTGTATGAACGACTGTTGACGACGAAGATCTTGAG
GATTGACATGGGGTAATTTT

Downstream 100 bases:

>100_bases
TCGCAAATCCGGGAGCCATCGCCCCCCCTGGGACAGGGATCCCGGTTGGTCAGTACCGGCCAGGGATCCCCTATTCTCTG
CTGTGCTCTGAATTTTTGCT

Product: polar amino acid ABC transporter amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNWIKHLNGLAPLAGALALSMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLDDQGKYVGFDIDICRAVAAAL
FGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRDREWAVTFGPTTYYDGQGFMVRKSLGVEKLEDLNGATICVI
AGTTTELNLADTFRARGIAFTPVTFDGDDSSFNAYEEGRCDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVP
HGDESFSDIMNWTVYALFYAEEKGITSANVDEFLKSEDPDIRRFLGQEGNLGELLGLKPDWVVNVIKAVGNYGEIFNRHL
TPLGVPRGLNQPYTKGGIQYAPPFR

Sequences:

>Translated_345_residues
MNWIKHLNGLAPLAGALALSMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLDDQGKYVGFDIDICRAVAAAL
FGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRDREWAVTFGPTTYYDGQGFMVRKSLGVEKLEDLNGATICVI
AGTTTELNLADTFRARGIAFTPVTFDGDDSSFNAYEEGRCDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVP
HGDESFSDIMNWTVYALFYAEEKGITSANVDEFLKSEDPDIRRFLGQEGNLGELLGLKPDWVVNVIKAVGNYGEIFNRHL
TPLGVPRGLNQPYTKGGIQYAPPFR
>Mature_345_residues
MNWIKHLNGLAPLAGALALSMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLDDQGKYVGFDIDICRAVAAAL
FGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRDREWAVTFGPTTYYDGQGFMVRKSLGVEKLEDLNGATICVI
AGTTTELNLADTFRARGIAFTPVTFDGDDSSFNAYEEGRCDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVP
HGDESFSDIMNWTVYALFYAEEKGITSANVDEFLKSEDPDIRRFLGQEGNLGELLGLKPDWVVNVIKAVGNYGEIFNRHL
TPLGVPRGLNQPYTKGGIQYAPPFR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=226, Percent_Identity=25.6637168141593, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 37725; Mature: 37725

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWIKHLNGLAPLAGALALSMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLD
CCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCC
DQGKYVGFDIDICRAVAAALFGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRD
CCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCEEEEECCCEEEEECC
REWAVTFGPTTYYDGQGFMVRKSLGVEKLEDLNGATICVIAGTTTELNLADTFRARGIAF
CEEEEEECCCEEECCCCEEEEECCCHHHHHHCCCCEEEEEECCCCEEEHHHHHHHCCEEE
TPVTFDGDDSSFNAYEEGRCDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVP
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECHHHHCCCCCCCCCC
HGDESFSDIMNWTVYALFYAEEKGITSANVDEFLKSEDPDIRRFLGQEGNLGELLGLKPD
CCCHHHHHHHHEEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCHHHCCCCHH
WVVNVIKAVGNYGEIFNRHLTPLGVPRGLNQPYTKGGIQYAPPFR
HHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCC
>Mature Secondary Structure
MNWIKHLNGLAPLAGALALSMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLD
CCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCC
DQGKYVGFDIDICRAVAAALFGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRD
CCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCEEEEECCCEEEEECC
REWAVTFGPTTYYDGQGFMVRKSLGVEKLEDLNGATICVIAGTTTELNLADTFRARGIAF
CEEEEEECCCEEECCCCEEEEECCCHHHHHHCCCCEEEEEECCCCEEEHHHHHHHCCEEE
TPVTFDGDDSSFNAYEEGRCDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVP
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECHHHHCCCCCCCCCC
HGDESFSDIMNWTVYALFYAEEKGITSANVDEFLKSEDPDIRRFLGQEGNLGELLGLKPD
CCCHHHHHHHHEEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCHHHCCCCHH
WVVNVIKAVGNYGEIFNRHLTPLGVPRGLNQPYTKGGIQYAPPFR
HHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]