| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is pyk [H]
Identifier: 86605894
GI number: 86605894
Start: 1219396
End: 1220859
Strand: Reverse
Name: pyk [H]
Synonym: CYA_1210
Alternate gene names: 86605894
Gene position: 1220859-1219396 (Counterclockwise)
Preceding gene: 86605896
Following gene: 86605892
Centisome position: 41.63
GC content: 63.66
Gene sequence:
>1464_bases ATGGCTTCCTCTTCCCCCTCTTCGCCTAAGCGTTTGCTAGAGCAGCTCCTGGAGCTGCGACAGCAAGTTGTGGAGGGATC CCAGAAGTACTTGACCGCCTGGGGCAGCCCCTGCAACCCCTCCCCCGCTCTCGAGAACCTAGCTCGGTATTTGGCGCTAC GCCAACACGATCTGCGCAACCTGCAATTGGAGCTGGCTGCGGTGGGGCTGTCCTCGCTGGGACGGTGTGAATCGCGGGTC TTAGAGACCCTGGATGCAGTGATCGCCACTTTGGCAGCCACGCAGGGCCTAAGCCACAAGGGGCCCAGCTATGAGGAGTT TTACGCTGGGGACATGGCGCTGGAGCAGCATGCTGAGGCGCTGTTTGGCCCTCCTTCTCCCCACCGCCGCGCCCGCATCA TGGTGACCCTGCCCAGCGAAGCTGCCGAGCAGCCCGAGCTGCTGCTGCAACTGCTGCAACGGGGGATGAACGTGGCCCGG ATCAACTGCGCCCACGACGATCCCCTGGTGTGGGAGAAAATGGTGGCCCACTTGCGCCAGGCCGAAGCCCAGACTCAACG GCGCTGCAAGATTTTGTTCGACCTGGCCGGCCCCAAGATCCGCACGGGCCTGGTGGCCATGCCACCCGGCAAAGCCAAGG TGTACGGTGGGGATCGCATCCTGCTCACGGCAGCCATTCCGCCGGTCGACTCTGACATCTGCTGCCAGGTGGCTTGCACC CTGCCGGAGATCTTGGCCCACCTCAAGGTGGGGGCAACTGTTTGGATCGACGACGGCAAAATCGGCGCTCGTGTAGTGGG GATCGAGCCGGCAGGGGTGGTGCTGGAGGTGGACAAAGTCGCCCCGCAGGGCAAGAAGCTGCGGGAGGAAAAAGGCCTCA ACTTTCCCGACAGCCAGCTCTCGATCCAGCCCCTCACCGAGAAAGATCGCCAAGACTTGGACTTCGTGGTGCGGCATGCC GACCTGGTGGGCTATTCCTTTGTCCAGCAGCCGGCGGATTTGCAGTTGCTGTTTTCTGAGCTGGAGCGGCGCCAGGCCCG GCCCGATCTGGGCTTGATCCTCAAGATTGAAACGCAGCGAGCGGTGCAAAACCTGCCCACTCTGATCGCGGCCGTCGACG GCTGCCGGCCCCTGGGGGTGATGATTGCCCGGGGAGATCTGGCCGTGGAGATTGGCTGGCTGCGCCTGGGCGAGATCCAG GAGGAGCTGCTGTGGATCTGTGAGGCCGCCCATGTGCCGGTAGTCTGGGCTACGCAGGTGCTGGATCAGCTCACCAAGGA GGGCCTGCCCTCCCGGCCTGAGCTTTCCGATGCGGTGCTGTCTGCCCGCGCCGAGTGCGTCATGCTCAATAAGGGCCCCT ATCTCCTGGAGGCGGTTGCCCTGCTGGACGAGCTGCTGGCCCGCATGCAGGCCCACCAGCACAAAAAAAGCCAACGCCTG CGAGCTTTGTACTCCTGGCGATGA
Upstream 100 bases:
>100_bases AGGTTAATCGCCTCCCTTTTTCACCCTAACTTGCCTATGATCGACCCAAGGCGGGCTTGGGCCGGGCGTTGGGCTTGTTT GTCTTGAGATAGCTTTCAGC
Downstream 100 bases:
>100_bases GATGGAGCGGCATCAAAGACGGAACTTCTCCCCCAGGTAATACTTGCGCACCAAGGGATCCGCCGCCAGCTCCGCTGGTG TGCCCTTGGCCAGGATGGCG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MASSSPSSPKRLLEQLLELRQQVVEGSQKYLTAWGSPCNPSPALENLARYLALRQHDLRNLQLELAAVGLSSLGRCESRV LETLDAVIATLAATQGLSHKGPSYEEFYAGDMALEQHAEALFGPPSPHRRARIMVTLPSEAAEQPELLLQLLQRGMNVAR INCAHDDPLVWEKMVAHLRQAEAQTQRRCKILFDLAGPKIRTGLVAMPPGKAKVYGGDRILLTAAIPPVDSDICCQVACT LPEILAHLKVGATVWIDDGKIGARVVGIEPAGVVLEVDKVAPQGKKLREEKGLNFPDSQLSIQPLTEKDRQDLDFVVRHA DLVGYSFVQQPADLQLLFSELERRQARPDLGLILKIETQRAVQNLPTLIAAVDGCRPLGVMIARGDLAVEIGWLRLGEIQ EELLWICEAAHVPVVWATQVLDQLTKEGLPSRPELSDAVLSARAECVMLNKGPYLLEAVALLDELLARMQAHQHKKSQRL RALYSWR
Sequences:
>Translated_487_residues MASSSPSSPKRLLEQLLELRQQVVEGSQKYLTAWGSPCNPSPALENLARYLALRQHDLRNLQLELAAVGLSSLGRCESRV LETLDAVIATLAATQGLSHKGPSYEEFYAGDMALEQHAEALFGPPSPHRRARIMVTLPSEAAEQPELLLQLLQRGMNVAR INCAHDDPLVWEKMVAHLRQAEAQTQRRCKILFDLAGPKIRTGLVAMPPGKAKVYGGDRILLTAAIPPVDSDICCQVACT LPEILAHLKVGATVWIDDGKIGARVVGIEPAGVVLEVDKVAPQGKKLREEKGLNFPDSQLSIQPLTEKDRQDLDFVVRHA DLVGYSFVQQPADLQLLFSELERRQARPDLGLILKIETQRAVQNLPTLIAAVDGCRPLGVMIARGDLAVEIGWLRLGEIQ EELLWICEAAHVPVVWATQVLDQLTKEGLPSRPELSDAVLSARAECVMLNKGPYLLEAVALLDELLARMQAHQHKKSQRL RALYSWR >Mature_486_residues ASSSPSSPKRLLEQLLELRQQVVEGSQKYLTAWGSPCNPSPALENLARYLALRQHDLRNLQLELAAVGLSSLGRCESRVL ETLDAVIATLAATQGLSHKGPSYEEFYAGDMALEQHAEALFGPPSPHRRARIMVTLPSEAAEQPELLLQLLQRGMNVARI NCAHDDPLVWEKMVAHLRQAEAQTQRRCKILFDLAGPKIRTGLVAMPPGKAKVYGGDRILLTAAIPPVDSDICCQVACTL PEILAHLKVGATVWIDDGKIGARVVGIEPAGVVLEVDKVAPQGKKLREEKGLNFPDSQLSIQPLTEKDRQDLDFVVRHAD LVGYSFVQQPADLQLLFSELERRQARPDLGLILKIETQRAVQNLPTLIAAVDGCRPLGVMIARGDLAVEIGWLRLGEIQE ELLWICEAAHVPVVWATQVLDQLTKEGLPSRPELSDAVLSARAECVMLNKGPYLLEAVALLDELLARMQAHQHKKSQRLR ALYSWR
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=352, Percent_Identity=31.25, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI10835121, Length=352, Percent_Identity=31.25, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI33286422, Length=364, Percent_Identity=31.3186813186813, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI33286420, Length=364, Percent_Identity=31.3186813186813, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI33286418, Length=364, Percent_Identity=31.3186813186813, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI310128732, Length=308, Percent_Identity=28.8961038961039, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI310128730, Length=308, Percent_Identity=28.8961038961039, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI310128736, Length=252, Percent_Identity=28.1746031746032, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI310128734, Length=252, Percent_Identity=28.1746031746032, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI310128738, Length=225, Percent_Identity=28, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1787965, Length=354, Percent_Identity=32.7683615819209, Blast_Score=151, Evalue=9e-38, Organism=Escherichia coli, GI1788160, Length=349, Percent_Identity=30.945558739255, Blast_Score=108, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17544584, Length=356, Percent_Identity=29.2134831460674, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI17506829, Length=417, Percent_Identity=29.4964028776978, Blast_Score=131, Evalue=9e-31, Organism=Caenorhabditis elegans, GI71984413, Length=417, Percent_Identity=29.4964028776978, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17506831, Length=359, Percent_Identity=31.1977715877437, Blast_Score=128, Evalue=8e-30, Organism=Caenorhabditis elegans, GI71984406, Length=359, Percent_Identity=31.1977715877437, Blast_Score=128, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6319279, Length=357, Percent_Identity=30.5322128851541, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6324923, Length=366, Percent_Identity=28.9617486338798, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI24648964, Length=383, Percent_Identity=31.5926892950392, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI28571814, Length=383, Percent_Identity=31.5926892950392, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24648966, Length=335, Percent_Identity=28.955223880597, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24581235, Length=370, Percent_Identity=23.7837837837838, Blast_Score=103, Evalue=4e-22,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 53710; Mature: 53579
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSPSSPKRLLEQLLELRQQVVEGSQKYLTAWGSPCNPSPALENLARYLALRQHDLRN CCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH LQLELAAVGLSSLGRCESRVLETLDAVIATLAATQGLSHKGPSYEEFYAGDMALEQHAEA HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHH LFGPPSPHRRARIMVTLPSEAAEQPELLLQLLQRGMNVARINCAHDDPLVWEKMVAHLRQ HCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH AEAQTQRRCKILFDLAGPKIRTGLVAMPPGKAKVYGGDRILLTAAIPPVDSDICCQVACT HHHHHHHHHEEEEECCCCCHHCCEEECCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHH LPEILAHLKVGATVWIDDGKIGARVVGIEPAGVVLEVDKVAPQGKKLREEKGLNFPDSQL HHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHCCCCCCCCCC SIQPLTEKDRQDLDFVVRHADLVGYSFVQQPADLQLLFSELERRQARPDLGLILKIETQR EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHH AVQNLPTLIAAVDGCRPLGVMIARGDLAVEIGWLRLGEIQEELLWICEAAHVPVVWATQV HHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCEEHHHHHHHHHHHHHHCCCCHHHHHHH LDQLTKEGLPSRPELSDAVLSARAECVMLNKGPYLLEAVALLDELLARMQAHQHKKSQRL HHHHHHCCCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALYSWR HHHHCCC >Mature Secondary Structure ASSSPSSPKRLLEQLLELRQQVVEGSQKYLTAWGSPCNPSPALENLARYLALRQHDLRN CCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH LQLELAAVGLSSLGRCESRVLETLDAVIATLAATQGLSHKGPSYEEFYAGDMALEQHAEA HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHH LFGPPSPHRRARIMVTLPSEAAEQPELLLQLLQRGMNVARINCAHDDPLVWEKMVAHLRQ HCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH AEAQTQRRCKILFDLAGPKIRTGLVAMPPGKAKVYGGDRILLTAAIPPVDSDICCQVACT HHHHHHHHHEEEEECCCCCHHCCEEECCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHH LPEILAHLKVGATVWIDDGKIGARVVGIEPAGVVLEVDKVAPQGKKLREEKGLNFPDSQL HHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHCCCCCCCCCC SIQPLTEKDRQDLDFVVRHADLVGYSFVQQPADLQLLFSELERRQARPDLGLILKIETQR EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHH AVQNLPTLIAAVDGCRPLGVMIARGDLAVEIGWLRLGEIQEELLWICEAAHVPVVWATQV HHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCEEHHHHHHHHHHHHHHCCCCHHHHHHH LDQLTKEGLPSRPELSDAVLSARAECVMLNKGPYLLEAVALLDELLARMQAHQHKKSQRL HHHHHHCCCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALYSWR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7549104 [H]