| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is pstS [H]
Identifier: 86605896
GI number: 86605896
Start: 1222248
End: 1223261
Strand: Reverse
Name: pstS [H]
Synonym: CYA_1212
Alternate gene names: 86605896
Gene position: 1223261-1222248 (Counterclockwise)
Preceding gene: 86605897
Following gene: 86605894
Centisome position: 41.71
GC content: 63.12
Gene sequence:
>1014_bases ATGACCGTACGACCTTCCGGCCCACCTCCGATTGTCTACATTCTTTTGCTGGCGATACTGGGGGGAGGCGGCTGGTATGC CTATCGTTCCGGCCTGCTTGACTCTTTCCTGAAGCGAGGGAACGCGCCTTCTGTCCCTGGCCAGATCCCGGCTGCCCAGC CGCAAGCGCCAACGGCCCCCAATCTTCCTCCAGCCCAGGCCCCCAACCAGCCACCCAGCGCGGTTAATCTGGATACTTCC CTGCCCAACCCGGCGGTGCTGCAGATGGACGGCAGCGTCACCATGATCCGCATTGTCTTGGCCTTGAAGTCAGGCTACAG CCAGCGCAACCCCGCCATCCCCATCACCTACGGGATCCCCGACGGCAAGCCCAATGGATCCAACGCCGGCCTCAAGGCCC TGATGGAAGGTCGCATCCAGCTTGCTGCCAGCTCTCGCCCCCTCAATGCCAGCGAAGTCCAGGCGGGTTTGCAGGCCATC CCGGTGGCCAAAGATGCCCTGGCGGTGGCGGTGGGGGTAAACAACCCCTACAAGGGCGGCCTGACGCTGCAGCAGTTGGC CGACATCTTCCAGGGCCGGATCACCAACTGGAGCCAGGTAGGCGGCCCCGATCGTCCGATTCGCGTTCTCAACCGCGCCC CTCAGAGCGGCACCTACAGCGTTTTCCAGGAGCTGGTGCTGTTGGGGCTGCCCTTTGCCCCCGATAACCCGCCCTACTTC ACCACTGCCACCCAGGATGCCACCACCCCTCTCCTGCGGGCTTTGGGAGAAGACGGCATCACCTACAGCACCGTGGATCA GGTGCAAAACCAGCAAACGGTGAGGATGGTGCCCATCGACGGCCAGATGCCCACCCGCGAGGCCATCCAAAGTGGCCGCT ACCCGCTGGCCCGCAACGTGTTTTTGGTGGTACCGCAAAAAACCAGCCCCGTGGTGGCTGATTTCATCAACTATGCCCTC TCCGACCAAGGCCAGCAAATCATTGGCCGCACCGAGTTCATCCCGCTGCGGTAG
Upstream 100 bases:
>100_bases CCCTTTAACCTGCGGCTTGCCCAGTCCGGGCAAACAGTTGATACAACAGAGGGGGAAAGTCCGCCAAAGTCTGGACTGCG AATTTCTCGAGGGGGATCCC
Downstream 100 bases:
>100_bases CTGGCCTTTGCCTAGCGATTGGCTCGGTAAAGTAGTCCTAGCCCCACTGCGGAGCAGATGAAGTTGGGCAACCAGGCCGC CACCTCCGGCCCCAAGGTTC
Product: phosphate ABC transporter substrate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTVRPSGPPPIVYILLLAILGGGGWYAYRSGLLDSFLKRGNAPSVPGQIPAAQPQAPTAPNLPPAQAPNQPPSAVNLDTS LPNPAVLQMDGSVTMIRIVLALKSGYSQRNPAIPITYGIPDGKPNGSNAGLKALMEGRIQLAASSRPLNASEVQAGLQAI PVAKDALAVAVGVNNPYKGGLTLQQLADIFQGRITNWSQVGGPDRPIRVLNRAPQSGTYSVFQELVLLGLPFAPDNPPYF TTATQDATTPLLRALGEDGITYSTVDQVQNQQTVRMVPIDGQMPTREAIQSGRYPLARNVFLVVPQKTSPVVADFINYAL SDQGQQIIGRTEFIPLR
Sequences:
>Translated_337_residues MTVRPSGPPPIVYILLLAILGGGGWYAYRSGLLDSFLKRGNAPSVPGQIPAAQPQAPTAPNLPPAQAPNQPPSAVNLDTS LPNPAVLQMDGSVTMIRIVLALKSGYSQRNPAIPITYGIPDGKPNGSNAGLKALMEGRIQLAASSRPLNASEVQAGLQAI PVAKDALAVAVGVNNPYKGGLTLQQLADIFQGRITNWSQVGGPDRPIRVLNRAPQSGTYSVFQELVLLGLPFAPDNPPYF TTATQDATTPLLRALGEDGITYSTVDQVQNQQTVRMVPIDGQMPTREAIQSGRYPLARNVFLVVPQKTSPVVADFINYAL SDQGQQIIGRTEFIPLR >Mature_336_residues TVRPSGPPPIVYILLLAILGGGGWYAYRSGLLDSFLKRGNAPSVPGQIPAAQPQAPTAPNLPPAQAPNQPPSAVNLDTSL PNPAVLQMDGSVTMIRIVLALKSGYSQRNPAIPITYGIPDGKPNGSNAGLKALMEGRIQLAASSRPLNASEVQAGLQAIP VAKDALAVAVGVNNPYKGGLTLQQLADIFQGRITNWSQVGGPDRPIRVLNRAPQSGTYSVFQELVLLGLPFAPDNPPYFT TATQDATTPLLRALGEDGITYSTVDQVQNQQTVRMVPIDGQMPTREAIQSGRYPLARNVFLVVPQKTSPVVADFINYALS DQGQQIIGRTEFIPLR
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35828; Mature: 35696
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRPSGPPPIVYILLLAILGGGGWYAYRSGLLDSFLKRGNAPSVPGQIPAAQPQAPTAP CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC NLPPAQAPNQPPSAVNLDTSLPNPAVLQMDGSVTMIRIVLALKSGYSQRNPAIPITYGIP CCCCCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCC DGKPNGSNAGLKALMEGRIQLAASSRPLNASEVQAGLQAIPVAKDALAVAVGVNNPYKGG CCCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC LTLQQLADIFQGRITNWSQVGGPDRPIRVLNRAPQSGTYSVFQELVLLGLPFAPDNPPYF CCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEE TTATQDATTPLLRALGEDGITYSTVDQVQNQQTVRMVPIDGQMPTREAIQSGRYPLARNV EECCCHHHHHHHHHHCCCCCEEHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCE FLVVPQKTSPVVADFINYALSDQGQQIIGRTEFIPLR EEEECCCCCCHHHHHHHHHHCCCCHHHHCCCCEECCC >Mature Secondary Structure TVRPSGPPPIVYILLLAILGGGGWYAYRSGLLDSFLKRGNAPSVPGQIPAAQPQAPTAP CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC NLPPAQAPNQPPSAVNLDTSLPNPAVLQMDGSVTMIRIVLALKSGYSQRNPAIPITYGIP CCCCCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCC DGKPNGSNAGLKALMEGRIQLAASSRPLNASEVQAGLQAIPVAKDALAVAVGVNNPYKGG CCCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC LTLQQLADIFQGRITNWSQVGGPDRPIRVLNRAPQSGTYSVFQELVLLGLPFAPDNPPYF CCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEE TTATQDATTPLLRALGEDGITYSTVDQVQNQQTVRMVPIDGQMPTREAIQSGRYPLARNV EECCCHHHHHHHHHHCCCCCEEHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCE FLVVPQKTSPVVADFINYALSDQGQQIIGRTEFIPLR EEEECCCCCCHHHHHHHHHHCCCCHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA