Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605888

Identifier: 86605888

GI number: 86605888

Start: 1213464

End: 1214252

Strand: Reverse

Name: 86605888

Synonym: CYA_1202

Alternate gene names: NA

Gene position: 1214252-1213464 (Counterclockwise)

Preceding gene: 86605889

Following gene: 86605885

Centisome position: 41.4

GC content: 64.39

Gene sequence:

>789_bases
ATGGAAACATTGAAGGGCAAGCCCATTGCCTCTAGTCCAAGCCGCCAGAAGCGGCCCTTGCTGCTCTATTTGCCGGGTAT
GGATGGCACCGGCAAATTGTTTTACCGGCAGGCACAGGCTCTGCAAGCCGAGTTTCACGTCCGCCCTTTGAGCTTAAACC
ACCCCGCAGCAGGGCAGAGCTGGGAGAGCCTGGCCGATTGGGTGGGATCCCAGCTGGACGAGGGAGCCTACCTGTGTGGC
GAGTCCTTCGGAGCTTGCCTAGCCCTGGCTGTGGCTGCCCAGCAGCCGGAGCGCTGTCGTGGCCTGATTCTGGTTAATCC
GGCCTCGTCGCTGCGGCGCCGGCCCTGGTGGTGGGCAGGTCATGTTCTCCTGCCTTTTTTGCCGCCGGCGCTCTACCACC
AGATGGCGGAGCGGGGGCTGGGATTTTTGGCGGAGCTAAGCCAAATGGAGCCGCCGGATCGGGAGCGGCTGCGCCAGGCC
GTTCACAGTGTTGAGCCCACGGTGGCCGCCCAGCGCCTGGCCTTGCTGGGATCGTTTGTCGTGGAGGAGCTGCCCCTGGA
GTCGATGACCCTGCCGACGTTGCTGGTGGCGGGGGGGCGGGATCGCCTCCTGCCCTCGGTGCAGGAGGTGCAGCGTCTGG
CGGAGCGACTGCCCCAGGCCCAGGTGGAGATCTCGCCTTTAAGCGGCCATGCTTGCCTTCTGGAGCGGCAGATGAACCTG
CGGCGCTACTTGCTCAAGCCCGATGGGGTTTTTGCCCCGCTACTGCTTAATTCCGCTCCAGCGCATTGA

Upstream 100 bases:

>100_bases
GGGGAGCAGGGCGCTCTACCTGCCGCCAGGAGCGGCTGCAGCTAATTCAGGAGTTGACGGCAGCCGCTCGCGAACAGGTG
CGCTTGGGGTTGGCAAGGAG

Downstream 100 bases:

>100_bases
GCAGGGAGAGGGATCCCCCCAAGTTTTCGATTCGCTCTTGGCAGGAGGGATCTTGTCCTTCTCGATCCAGCCAAAGGGCC
CTCAAGCCTGCTGCCTTGGC

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold-Containing Protein

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQSWESLADWVGSQLDEGAYLCG
ESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQA
VHSVEPTVAAQRLALLGSFVVEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL
RRYLLKPDGVFAPLLLNSAPAH

Sequences:

>Translated_262_residues
METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQSWESLADWVGSQLDEGAYLCG
ESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQA
VHSVEPTVAAQRLALLGSFVVEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL
RRYLLKPDGVFAPLLLNSAPAH
>Mature_262_residues
METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQSWESLADWVGSQLDEGAYLCG
ESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQA
VHSVEPTVAAQRLALLGSFVVEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL
RRYLLKPDGVFAPLLLNSAPAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28952; Mature: 28952

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQS
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
WESLADWVGSQLDEGAYLCGESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHCCCCEEEC
HVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQAVHSVEPTVAAQRLALLGSFV
CCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
VEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL
HHHCCCCHHCHHHHEEECCHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
RRYLLKPDGVFAPLLLNSAPAH
HHHHCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQS
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
WESLADWVGSQLDEGAYLCGESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHCCCCEEEC
HVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQAVHSVEPTVAAQRLALLGSFV
CCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
VEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL
HHHCCCCHHCHHHHEEECCHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
RRYLLKPDGVFAPLLLNSAPAH
HHHHCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA