| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605885
Identifier: 86605885
GI number: 86605885
Start: 1210709
End: 1211260
Strand: Reverse
Name: 86605885
Synonym: CYA_1199
Alternate gene names: NA
Gene position: 1211260-1210709 (Counterclockwise)
Preceding gene: 86605888
Following gene: 86605883
Centisome position: 41.3
GC content: 59.96
Gene sequence:
>552_bases ATGTTTACCCAATCGGCTACACCCGCTACGTCAGGGCTGCCACAAATGGATTTGACGCAAGTCCCGCCAGAGATTACCTG CGATGGCAGCGACTTAGACTGGAGCCAAGCCGCAGCGATCGAGGGCACCCAACCCCAAGAGGAGAACTTGCAGGGCTGGA TCGCCTTTTACGGCCTGCGGGTCAACCAAGAACCGGGCAACATCCTGCACTGGCAGGGGCAGCCGCTGCGGGCCAGCCGC ATTCGCTTTTTTGTGAAAAATGTGGCTTGGCGCTATGGCTTTTCTTTCTCCACCAGCATCCGCTCTCCTCTCGGCAAAGG GATCCCCACGCCTTCGGAGTGGCGCTACCCCGGTCTTTGCCGCTACGGCCTGGTGCTGTTCCAGCCCAACGCCCGGTTGG TGGCCCGGCAGGTCTGGGAATCCTCGCCGGAGCAGCCGCAAGAGGTGGATCTGGATCCCAACTTGGATATCGCCTTCAAC GTCAATGACGCCAAGGGCAGCTACGGCGACAACAGCGGCAGCTTCGATATCTATGTGCAGGTGGTGAACTGA
Upstream 100 bases:
>100_bases GGTTTGTCTTTAAAACCTTTCCCCGGCTCATTTTTGGGATCCCTGTAAGCTCTTTACAGCTTCTCACTTCTGGAGTCATT TTGAAGAAAAGGAGAGATAG
Downstream 100 bases:
>100_bases GCTGCAGCAGGGATCCCGCTCGAGAACAGTTGCCGGGTGGGATCCCATCTTCTACAATAGGTGAACCGGCGGCTGGATCC CAGCTTGCTGAGGTCTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MFTQSATPATSGLPQMDLTQVPPEITCDGSDLDWSQAAAIEGTQPQEENLQGWIAFYGLRVNQEPGNILHWQGQPLRASR IRFFVKNVAWRYGFSFSTSIRSPLGKGIPTPSEWRYPGLCRYGLVLFQPNARLVARQVWESSPEQPQEVDLDPNLDIAFN VNDAKGSYGDNSGSFDIYVQVVN
Sequences:
>Translated_183_residues MFTQSATPATSGLPQMDLTQVPPEITCDGSDLDWSQAAAIEGTQPQEENLQGWIAFYGLRVNQEPGNILHWQGQPLRASR IRFFVKNVAWRYGFSFSTSIRSPLGKGIPTPSEWRYPGLCRYGLVLFQPNARLVARQVWESSPEQPQEVDLDPNLDIAFN VNDAKGSYGDNSGSFDIYVQVVN >Mature_183_residues MFTQSATPATSGLPQMDLTQVPPEITCDGSDLDWSQAAAIEGTQPQEENLQGWIAFYGLRVNQEPGNILHWQGQPLRASR IRFFVKNVAWRYGFSFSTSIRSPLGKGIPTPSEWRYPGLCRYGLVLFQPNARLVARQVWESSPEQPQEVDLDPNLDIAFN VNDAKGSYGDNSGSFDIYVQVVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20440; Mature: 20440
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTQSATPATSGLPQMDLTQVPPEITCDGSDLDWSQAAAIEGTQPQEENLQGWIAFYGLR CCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCHHEECCCCCCCHHCCCEEEEEEEEE VNQEPGNILHWQGQPLRASRIRFFVKNVAWRYGFSFSTSIRSPLGKGIPTPSEWRYPGLC EECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEECCHHHHHHHCCCCCCCCCCCCCEE RYGLVLFQPNARLVARQVWESSPEQPQEVDLDPNLDIAFNVNDAKGSYGDNSGSFDIYVQ EECEEEECCCHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEE VVN EEC >Mature Secondary Structure MFTQSATPATSGLPQMDLTQVPPEITCDGSDLDWSQAAAIEGTQPQEENLQGWIAFYGLR CCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCHHEECCCCCCCHHCCCEEEEEEEEE VNQEPGNILHWQGQPLRASRIRFFVKNVAWRYGFSFSTSIRSPLGKGIPTPSEWRYPGLC EECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEECCHHHHHHHCCCCCCCCCCCCCEE RYGLVLFQPNARLVARQVWESSPEQPQEVDLDPNLDIAFNVNDAKGSYGDNSGSFDIYVQ EECEEEECCCHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEE VVN EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA