Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605796

Identifier: 86605796

GI number: 86605796

Start: 1132684

End: 1133100

Strand: Reverse

Name: 86605796

Synonym: CYA_1107

Alternate gene names: NA

Gene position: 1133100-1132684 (Counterclockwise)

Preceding gene: 86605797

Following gene: 86605795

Centisome position: 38.64

GC content: 53.96

Gene sequence:

>417_bases
ATGGCGATCTCAACCAACTCTCTATCTCCTAACTTTTCTCCATCGACAACTTCGGCTCAAGCTGAGGCCGAACATTACCT
CTGGATCTGCACCACCTGCGGATCTCGCTGGGTGAACGGCCAAAAAGAAGGGACTAGCAAAGGAGAAATGCTCCTGGCCG
CCTTGCAATCGCAAGTGCTCAATTCCCAATTGCACCTGAAGCCAGTTGCCTGTATGAGCGGCTGCAGCCATGCCTGCGTG
ATTGCCCTAGCAGCCCCGGGGAAGATGACCTATGTCTTTGGCGATCTCGATCCAAAAGATGTAGAGCCAATCTTACAAAC
GGCGGAGCTGTATTTGACAAAGCCCGATGGGATCCTGCCCTGGGCAGAGCGCCCCATCAAAAAGGGGGTGATTGCCCGCA
TTCCGCCAATCCAATAG

Upstream 100 bases:

>100_bases
TAGCGATATCCCAGGCTGTTTTTAACTCTCCGGCTGACCACTTTTAGCGAGAACTTTCCAAGTTGATTGTCTGCTTTACG
GTTTAGTTTGGATGCAACTT

Downstream 100 bases:

>100_bases
GAGCAACCTATGGCCGCTTTCAGTCCCTGGATCACGCCCTTAAACCAGACTTGGCAAGAGGTTTCCCCCACCGGCTGGAC
AACCGTTTACGAAGGGATCC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MAISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVLNSQLHLKPVACMSGCSHACV
IALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILPWAERPIKKGVIARIPPIQ

Sequences:

>Translated_138_residues
MAISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVLNSQLHLKPVACMSGCSHACV
IALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILPWAERPIKKGVIARIPPIQ
>Mature_137_residues
AISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVLNSQLHLKPVACMSGCSHACVI
ALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILPWAERPIKKGVIARIPPIQ

Specific function: Unknown

COG id: COG5469

COG function: function code S; Predicted metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14852; Mature: 14721

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVL
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
NSQLHLKPVACMSGCSHACVIALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILP
CCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCCCC
WAERPIKKGVIARIPPIQ
CCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
AISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVL
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
NSQLHLKPVACMSGCSHACVIALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILP
CCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCCCC
WAERPIKKGVIARIPPIQ
CCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA