Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605794

Identifier: 86605794

GI number: 86605794

Start: 1131148

End: 1131801

Strand: Reverse

Name: 86605794

Synonym: CYA_1105

Alternate gene names: NA

Gene position: 1131801-1131148 (Counterclockwise)

Preceding gene: 86605795

Following gene: 86605793

Centisome position: 38.59

GC content: 55.5

Gene sequence:

>654_bases
ATGGTTAGCCTACAAGCTCTTGTCCAGTCCATCCCCAAGCCTCGCCGCGGGATCCCAGAAGTAATTTGGATCCAAGCCAG
CCGAGATCTAGCCCAAGGTCGATTTTGGCCCAGCCTATTTACCACCATCGGCTGCCTGAGCAACATTGCCTATACCTGCA
CGCTTCCTTTTGTAACTGTTGGCATCATCGCGGGCACCACGTTAACTCGCCAAAGGGCAATTATTAGCGCTTCGATGATT
TGGCTGGCCAACCAAATCTTTGGCTACACCTGGCACAACTATCCCCGTACACCTGATTCTTTTGCTTGGGGGTTGGTCTT
GGGGATCGGCACGGTGGGGGTCGCTTTTGCTGCCGGCTACCGACCTCTGTTTTCTCAGTCCAAACCTATTAGGCCAAGGC
AATTGCTGCTGAACTATCTTTGGATCCCAGCCATGCTGATCCTAGGGTTCCTTGCTTTTGAAGGGCTGATCTTGGCAGCC
GGCCTGGTTCTGGGCGGAACGGAGGGCTTGACCCTGCCCATCTTGGCCAAGATCTGGCTGGACAACTGGCTGTGGACGGG
ATTTTGGCTTGGGATCCACGCGCTGCTGGCGTGGGACAGAGGACGCCGGTTGTGGTGGGAGAGGGGAAACTTCGCTGATC
TGGAGCATCCCTAA

Upstream 100 bases:

>100_bases
GTACAAGCGGGTTACCCCCCAAGTAGCGCGGCAAATTGTCCAGGAGCATCTGCTAAAGAACTGCCCCTTGAAAGCTCACC
TTTTTCCTGGAGATTAGCCT

Downstream 100 bases:

>100_bases
GGGAGATCCAGGCCACAATGGGGGTGACCTGTGCCAGAAGGGATCCCTTTGCAGCCTGCTCAACTCGATTGTGGCGGGAG
CGCTTTCCGCCTGTCTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MVSLQALVQSIPKPRRGIPEVIWIQASRDLAQGRFWPSLFTTIGCLSNIAYTCTLPFVTVGIIAGTTLTRQRAIISASMI
WLANQIFGYTWHNYPRTPDSFAWGLVLGIGTVGVAFAAGYRPLFSQSKPIRPRQLLLNYLWIPAMLILGFLAFEGLILAA
GLVLGGTEGLTLPILAKIWLDNWLWTGFWLGIHALLAWDRGRRLWWERGNFADLEHP

Sequences:

>Translated_217_residues
MVSLQALVQSIPKPRRGIPEVIWIQASRDLAQGRFWPSLFTTIGCLSNIAYTCTLPFVTVGIIAGTTLTRQRAIISASMI
WLANQIFGYTWHNYPRTPDSFAWGLVLGIGTVGVAFAAGYRPLFSQSKPIRPRQLLLNYLWIPAMLILGFLAFEGLILAA
GLVLGGTEGLTLPILAKIWLDNWLWTGFWLGIHALLAWDRGRRLWWERGNFADLEHP
>Mature_217_residues
MVSLQALVQSIPKPRRGIPEVIWIQASRDLAQGRFWPSLFTTIGCLSNIAYTCTLPFVTVGIIAGTTLTRQRAIISASMI
WLANQIFGYTWHNYPRTPDSFAWGLVLGIGTVGVAFAAGYRPLFSQSKPIRPRQLLLNYLWIPAMLILGFLAFEGLILAA
GLVLGGTEGLTLPILAKIWLDNWLWTGFWLGIHALLAWDRGRRLWWERGNFADLEHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24332; Mature: 24332

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLQALVQSIPKPRRGIPEVIWIQASRDLAQGRFWPSLFTTIGCLSNIAYTCTLPFVTV
CCCHHHHHHHCCCCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GIIAGTTLTRQRAIISASMIWLANQIFGYTWHNYPRTPDSFAWGLVLGIGTVGVAFAAGY
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
RPLFSQSKPIRPRQLLLNYLWIPAMLILGFLAFEGLILAAGLVLGGTEGLTLPILAKIWL
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DNWLWTGFWLGIHALLAWDRGRRLWWERGNFADLEHP
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MVSLQALVQSIPKPRRGIPEVIWIQASRDLAQGRFWPSLFTTIGCLSNIAYTCTLPFVTV
CCCHHHHHHHCCCCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GIIAGTTLTRQRAIISASMIWLANQIFGYTWHNYPRTPDSFAWGLVLGIGTVGVAFAAGY
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
RPLFSQSKPIRPRQLLLNYLWIPAMLILGFLAFEGLILAAGLVLGGTEGLTLPILAKIWL
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DNWLWTGFWLGIHALLAWDRGRRLWWERGNFADLEHP
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA