| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605766
Identifier: 86605766
GI number: 86605766
Start: 1088233
End: 1088388
Strand: Reverse
Name: 86605766
Synonym: CYA_1070
Alternate gene names: NA
Gene position: 1088388-1088233 (Counterclockwise)
Preceding gene: 86605768
Following gene: 86605763
Centisome position: 37.11
GC content: 57.05
Gene sequence:
>156_bases TTGCCGGCTTCTCTGTCTGGTCTGCAAAGGTTGCTGGCCCAAACCGGCTCCAGACCTGTCTTCCACTGCCACTCCTGTCT AGATACCACCGTTAGTTTGCCGCCCATCGCCTTGTCCGGCCAGCTTTCGCCTCATTGGGTGGAAAATCCCTGTTGA
Upstream 100 bases:
>100_bases GGATCCGCTCCCCCAAAAGCCACGCCAGCCGGGATCCCTGGGGCCGGTGGCTGGGCGGCCAAGGGGGCCAAGCAGGTCTG CCCCGCTGCCGTTGGGCAAG
Downstream 100 bases:
>100_bases CGCAACGCTTCAAAGAGGGCGATCGCCACCGCATTGCTGAGATTGAGGCTGCGCACCGGCCCGCTCAGGGGGATGCGCAC ACTGGGATAGGTTTCCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MPASLSGLQRLLAQTGSRPVFHCHSCLDTTVSLPPIALSGQLSPHWVENPC
Sequences:
>Translated_51_residues MPASLSGLQRLLAQTGSRPVFHCHSCLDTTVSLPPIALSGQLSPHWVENPC >Mature_50_residues PASLSGLQRLLAQTGSRPVFHCHSCLDTTVSLPPIALSGQLSPHWVENPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5454; Mature: 5323
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASLSGLQRLLAQTGSRPVFHCHSCLDTTVSLPPIALSGQLSPHWVENPC CCCCHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure PASLSGLQRLLAQTGSRPVFHCHSCLDTTVSLPPIALSGQLSPHWVENPC CCCHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA