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The map label for this gene is arnC [H]

Identifier: 86605768

GI number: 86605768

Start: 1090358

End: 1091581

Strand: Reverse

Name: arnC [H]

Synonym: CYA_1073

Alternate gene names: 86605768

Gene position: 1091581-1090358 (Counterclockwise)

Preceding gene: 86605769

Following gene: 86605766

Centisome position: 37.22

GC content: 57.6

Gene sequence:

>1224_bases
ATGCCTCATGTAGCTCCTGCTTCGTCCACCCATCTGCAAGCTTCGGCAGTCCCTATTCAGATCCCGCCGCTCTCTCAACC
CAGCTCTGTCCAACTTTCGCTGGTCGTTCCCACCTATAACGAGGCCTCCAGCATTTGCAGCCTGATCCGGCAGTTGTGCG
CCCACCTCGACACGATTCTACCGGGAGCCTACGAGCTGATTGTGGTGGACGACAACAGCCCGGATTACACCGCCAAGTTG
GCCCAGGAACTGCAAGAGGAGCTTCCCCAACTCAAAGTTATCTGCCGCCAGCGGGAACGGGGCCTGGCCACGGCTGTGTT
GCGCGGATGGCAAGCGGCCCGCGGCGAGGTGCTGGGGGTGATGGACGGGGATCTGCAGCATCCGCCGGAGATCATTCTCA
AGCTATGGCCTGCCATCCAAGAGGGAGCAGACCTAGTGGTGGGCAGCCGCTACGTGGGGTCGGGGGGGGTGAGCCACTGG
AACCTGGGCCGGCGCCTCGTCTCTCGGGGAGCTCAAGCCATCGGGCTGGTTTTGCTGCCAGGGGTTTTTAGGCGGGTGTC
GGATCCGCTCAGCGGGTTATTTCTGGTCAGACGCCAGGCCATTGCCGGGATCCCGCTCAGCCCCAAGGGTTACAAGCTGC
TGATCGAGGTGCTGGCACGGGGCCGGGTGACAACCATTGCTGAAGTCGGCTACATCTTTCAGGAGCGCCAAAACGGCGAG
AGCAAAATTCAACTGCAAACCTGTCTTCAGTATCTCCACCATCTCATTCACCTGCGCTTCTCGCTAGGGCAGGTGGGAGC
CTTTTTGCGCTTCAGCACAGTCGGCCTGTCAGGCACGGTGGTGGACATGGTTTTGCTCTATTTGTTACACGACCCGGCCA
ACTTAGGATGGGATCTCATCACGAGTAAGCTGATCGCTTCGGAAATGGCCATTCTCAATAACTTCCTGTGGAACGATCTG
TGGACGTTTCGCCATGTTACCCGATTGCAGCCGGGCCTCTCGAACCGCCTGAAGCGGCTGGCCAAGTTTAATATGATCTG
TTTGATCGGCCTGTTTCTTAACTCTTCGCTGGTGATTTTGCTGAGCGAGCGCTTGGGCATTCACTATCTGTTGGCCAACT
TAATTGCGATCGGTATTGTTGTATTCTGGAACTTCTACCTCAACTCCAAGCTGAGCTGGAAAAGTGCAGAGGCTAAGCTG
GATCCCGGGGGCGACAAGTCTTGA

Upstream 100 bases:

>100_bases
GGCGCGTGGCGCTGTTGCGAAGCGACACAGCTCCAAGTTTGACCTGCACTCAAGCTCTCCGCTTAGGATCCGTTACCCTC
GTTTTTGGATGGCCTGCTGA

Downstream 100 bases:

>100_bases
GCGTCTGGTTATTTCAGACCCAATTAAGACACTCCTGAAGCGCTCTGCTCCAGTGCCCTCATCCTCAACTCCTCTCCCAA
GGAGTTAAGGATCGGCTTCT

Product: glycosyl transferase, group 2

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MPHVAPASSTHLQASAVPIQIPPLSQPSSVQLSLVVPTYNEASSICSLIRQLCAHLDTILPGAYELIVVDDNSPDYTAKL
AQELQEELPQLKVICRQRERGLATAVLRGWQAARGEVLGVMDGDLQHPPEIILKLWPAIQEGADLVVGSRYVGSGGVSHW
NLGRRLVSRGAQAIGLVLLPGVFRRVSDPLSGLFLVRRQAIAGIPLSPKGYKLLIEVLARGRVTTIAEVGYIFQERQNGE
SKIQLQTCLQYLHHLIHLRFSLGQVGAFLRFSTVGLSGTVVDMVLLYLLHDPANLGWDLITSKLIASEMAILNNFLWNDL
WTFRHVTRLQPGLSNRLKRLAKFNMICLIGLFLNSSLVILLSERLGIHYLLANLIAIGIVVFWNFYLNSKLSWKSAEAKL
DPGGDKS

Sequences:

>Translated_407_residues
MPHVAPASSTHLQASAVPIQIPPLSQPSSVQLSLVVPTYNEASSICSLIRQLCAHLDTILPGAYELIVVDDNSPDYTAKL
AQELQEELPQLKVICRQRERGLATAVLRGWQAARGEVLGVMDGDLQHPPEIILKLWPAIQEGADLVVGSRYVGSGGVSHW
NLGRRLVSRGAQAIGLVLLPGVFRRVSDPLSGLFLVRRQAIAGIPLSPKGYKLLIEVLARGRVTTIAEVGYIFQERQNGE
SKIQLQTCLQYLHHLIHLRFSLGQVGAFLRFSTVGLSGTVVDMVLLYLLHDPANLGWDLITSKLIASEMAILNNFLWNDL
WTFRHVTRLQPGLSNRLKRLAKFNMICLIGLFLNSSLVILLSERLGIHYLLANLIAIGIVVFWNFYLNSKLSWKSAEAKL
DPGGDKS
>Mature_406_residues
PHVAPASSTHLQASAVPIQIPPLSQPSSVQLSLVVPTYNEASSICSLIRQLCAHLDTILPGAYELIVVDDNSPDYTAKLA
QELQEELPQLKVICRQRERGLATAVLRGWQAARGEVLGVMDGDLQHPPEIILKLWPAIQEGADLVVGSRYVGSGGVSHWN
LGRRLVSRGAQAIGLVLLPGVFRRVSDPLSGLFLVRRQAIAGIPLSPKGYKLLIEVLARGRVTTIAEVGYIFQERQNGES
KIQLQTCLQYLHHLIHLRFSLGQVGAFLRFSTVGLSGTVVDMVLLYLLHDPANLGWDLITSKLIASEMAILNNFLWNDLW
TFRHVTRLQPGLSNRLKRLAKFNMICLIGLFLNSSLVILLSERLGIHYLLANLIAIGIVVFWNFYLNSKLSWKSAEAKLD
PGGDKS

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=241, Percent_Identity=34.0248962655602, Blast_Score=120, Evalue=3e-27,
Organism=Escherichia coli, GI1788588, Length=117, Percent_Identity=34.1880341880342, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71999402, Length=240, Percent_Identity=35, Blast_Score=118, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6325441, Length=258, Percent_Identity=32.9457364341085, Blast_Score=134, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24585265, Length=237, Percent_Identity=35.0210970464135, Blast_Score=125, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 44890; Mature: 44759

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVAPASSTHLQASAVPIQIPPLSQPSSVQLSLVVPTYNEASSICSLIRQLCAHLDTIL
CCCCCCCCCCCEEECCCEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
PGAYELIVVDDNSPDYTAKLAQELQEELPQLKVICRQRERGLATAVLRGWQAARGEVLGV
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
MDGDLQHPPEIILKLWPAIQEGADLVVGSRYVGSGGVSHWNLGRRLVSRGAQAIGLVLLP
ECCCCCCCHHHHHHHHHHHHCCCCEEECCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHH
GVFRRVSDPLSGLFLVRRQAIAGIPLSPKGYKLLIEVLARGRVTTIAEVGYIFQERQNGE
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
SKIQLQTCLQYLHHLIHLRFSLGQVGAFLRFSTVGLSGTVVDMVLLYLLHDPANLGWDLI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH
TSKLIASEMAILNNFLWNDLWTFRHVTRLQPGLSNRLKRLAKFNMICLIGLFLNSSLVIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LSERLGIHYLLANLIAIGIVVFWNFYLNSKLSWKSAEAKLDPGGDKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PHVAPASSTHLQASAVPIQIPPLSQPSSVQLSLVVPTYNEASSICSLIRQLCAHLDTIL
CCCCCCCCCCEEECCCEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
PGAYELIVVDDNSPDYTAKLAQELQEELPQLKVICRQRERGLATAVLRGWQAARGEVLGV
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
MDGDLQHPPEIILKLWPAIQEGADLVVGSRYVGSGGVSHWNLGRRLVSRGAQAIGLVLLP
ECCCCCCCHHHHHHHHHHHHCCCCEEECCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHH
GVFRRVSDPLSGLFLVRRQAIAGIPLSPKGYKLLIEVLARGRVTTIAEVGYIFQERQNGE
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
SKIQLQTCLQYLHHLIHLRFSLGQVGAFLRFSTVGLSGTVVDMVLLYLLHDPANLGWDLI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH
TSKLIASEMAILNNFLWNDLWTFRHVTRLQPGLSNRLKRLAKFNMICLIGLFLNSSLVIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LSERLGIHYLLANLIAIGIVVFWNFYLNSKLSWKSAEAKLDPGGDKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA