| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605737
Identifier: 86605737
GI number: 86605737
Start: 1061915
End: 1063738
Strand: Reverse
Name: 86605737
Synonym: CYA_1042
Alternate gene names: NA
Gene position: 1063738-1061915 (Counterclockwise)
Preceding gene: 86605738
Following gene: 86605736
Centisome position: 36.27
GC content: 62.12
Gene sequence:
>1824_bases ATGGCGGTTTGGGATACGCTGGCAACTTCTCGGCGTCCGGCCCTGCTGGGATCCGGCTTGGGCTTGGGGATAGCCTTGAC CCTTGGGTATGGGCTGTTCGGCTACCACGTCTTGCAGGTTGGCATCTGGTTGTTGAGCATCCTGTTGGTGGGGTTGTACG TGGCCCAGTTTCCCCCAGCTCAGCCCCCTTGGGATCCGACGCGGCTGCGCTGGCGCCAGGAGTTGCTGCACCTGGGGCTA TTGGCGTTGGTTTTTGCTCCCATCTACCTCTACGACCTGGCCAACATCCCCTTTCAGATCAACACCGACGAGATTGTCAT CACCTCCATGGCCCGGCGGGCTTCAGCGGTACGCTACCCCGATATCTTTGGGCTGATGCCAGAGTACTTCTATTTTCCCC GCTTTATGTTCAGCCTCTTTGGCGGCCTGACGCGGCTGATGGGGGGAGTCACGCTGGTGAATGTGCGCACGGTGCATGCC ACCTTCGGGGTTGTCACCATTCTGGTGGCCTACGGGTTTTTTCGGTCGTTCTGGAACCCCCGGCTGGCCTTGGCGGCGGC GGCCCTCCTGGGATCCAACCACGCTCTGCTGGGCATCAGCCGCATGGCGATGCGGGAGAACCTGATTGTGCTGGTGGAGT GTGCGGCCCTGGCCTTGATCTTAAAGGGCGTGCGGGAAAAGAATCCCCTGCTTTTGTATTTGGGGGGAGGGGCAGCGGGT TTCTCCCTCTACGGCTATCTGCCGGGGCGGGTGGTGATCTTGCTGGGGTTGCTGTTTGGCGGCCTCTACCTGCTCCTGGG CCGGGAGGATCTGCAAGGAGAAAACAAGCAGGCCAACCCCTTCTGGACTTTGGCCAAGCTGACGGTGCCGGCGGCGCTGG GGTTTTTCCTGGTGGCTGCGCCCATTCTGGTGGCCACTGCCACTGCTCCGCCAGTGAGCGCCGAGTATGCCCGCCAGCAA TTTCTCTTTTTCCCAGAAGGGCGGGCGCTGCAGCAGATGTGGGTGAATGCCGCTACGCCAGCCGAGGCGGTGTGGCGCAA CATCCGCAACGGCCTAAGTATGTTCAACGACCCCAGCCAGCACGACCGGGGCTATATCTATCCCAACTACGGCCATGCCT TTGTAGATCCCCTGACAGGGGTCTTGATCTGGCTGGGGCTGGGATCCGGGCTCTACCGCCTTCTCAAAGGGCGCAGCCAA CCCCACGACTGGCTCTGCCTGGGCAGCTTCCTGTTTCTCTACCTGCTCTTTAGCTTGGCCATCACCAAAGCCCCCAACTA CACTCGCCTGCTGGTGATCCTGCCCTTTGTAGCCTACCTAACCCTGGAAGGGATCCAAGTGCTGGCAGGTCTCCTGGAAC GCTGGGGATCCCGGGCCGGGAGTTGGCTGCCGGCGGCGGCGATGGCGGGGGCAATCCTGCTGATTGGGGGGTGGAACCTG GCCATTTTTGGAGACTTTGTCCACAAAGGCTGGACGCAGGGCAACGATGTGGGGGCCACCGGGCGCTATGTGGCAGCTCG CCAAATGGATCCCGACCACCGCTTCTACCTGGCGGCCAGCACCGCCTACCCCTATTTCAGTTGGGGAGAACCCCCCTACT GGCAGAGTTGGATCCAGTTTTTTGCCGGGCCGGAGCAGGAGGTGCAGGTTTTTTCCCCGGAGGCCTTGCCGACCCAAGAC CTACAGCCGCCGTTTACCCTGTTCCTGAACGAGGGGGTATGGGATCAACAGGGGGCGGCGCTGCAGCGGCGCTTTCCCCA GGGGCAGTTGCACCGCATCCCGGCTGAGCGGGGGCTGTGGGCTTTTGAGGTGGGGGATCCCTAG
Upstream 100 bases:
>100_bases TTGCTTATTGATATTGCATAGAGAGGGGCCGGGGGTGAGGGATCGAACACCGGCAGAGGCCTGGTAGGCTGGGGTCAGTG CTGTTCCTCACTCCAGTCCT
Downstream 100 bases:
>100_bases AGCTCCCCCCCTGGTTTGGCCAACCCACTGTTCGCGGGACGGAGTCCTTTCGCGTCAGCGCGACGGAGTCCTTTCTTTTT ACCAGGCTAAAAGTAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MAVWDTLATSRRPALLGSGLGLGIALTLGYGLFGYHVLQVGIWLLSILLVGLYVAQFPPAQPPWDPTRLRWRQELLHLGL LALVFAPIYLYDLANIPFQINTDEIVITSMARRASAVRYPDIFGLMPEYFYFPRFMFSLFGGLTRLMGGVTLVNVRTVHA TFGVVTILVAYGFFRSFWNPRLALAAAALLGSNHALLGISRMAMRENLIVLVECAALALILKGVREKNPLLLYLGGGAAG FSLYGYLPGRVVILLGLLFGGLYLLLGREDLQGENKQANPFWTLAKLTVPAALGFFLVAAPILVATATAPPVSAEYARQQ FLFFPEGRALQQMWVNAATPAEAVWRNIRNGLSMFNDPSQHDRGYIYPNYGHAFVDPLTGVLIWLGLGSGLYRLLKGRSQ PHDWLCLGSFLFLYLLFSLAITKAPNYTRLLVILPFVAYLTLEGIQVLAGLLERWGSRAGSWLPAAAMAGAILLIGGWNL AIFGDFVHKGWTQGNDVGATGRYVAARQMDPDHRFYLAASTAYPYFSWGEPPYWQSWIQFFAGPEQEVQVFSPEALPTQD LQPPFTLFLNEGVWDQQGAALQRRFPQGQLHRIPAERGLWAFEVGDP
Sequences:
>Translated_607_residues MAVWDTLATSRRPALLGSGLGLGIALTLGYGLFGYHVLQVGIWLLSILLVGLYVAQFPPAQPPWDPTRLRWRQELLHLGL LALVFAPIYLYDLANIPFQINTDEIVITSMARRASAVRYPDIFGLMPEYFYFPRFMFSLFGGLTRLMGGVTLVNVRTVHA TFGVVTILVAYGFFRSFWNPRLALAAAALLGSNHALLGISRMAMRENLIVLVECAALALILKGVREKNPLLLYLGGGAAG FSLYGYLPGRVVILLGLLFGGLYLLLGREDLQGENKQANPFWTLAKLTVPAALGFFLVAAPILVATATAPPVSAEYARQQ FLFFPEGRALQQMWVNAATPAEAVWRNIRNGLSMFNDPSQHDRGYIYPNYGHAFVDPLTGVLIWLGLGSGLYRLLKGRSQ PHDWLCLGSFLFLYLLFSLAITKAPNYTRLLVILPFVAYLTLEGIQVLAGLLERWGSRAGSWLPAAAMAGAILLIGGWNL AIFGDFVHKGWTQGNDVGATGRYVAARQMDPDHRFYLAASTAYPYFSWGEPPYWQSWIQFFAGPEQEVQVFSPEALPTQD LQPPFTLFLNEGVWDQQGAALQRRFPQGQLHRIPAERGLWAFEVGDP >Mature_606_residues AVWDTLATSRRPALLGSGLGLGIALTLGYGLFGYHVLQVGIWLLSILLVGLYVAQFPPAQPPWDPTRLRWRQELLHLGLL ALVFAPIYLYDLANIPFQINTDEIVITSMARRASAVRYPDIFGLMPEYFYFPRFMFSLFGGLTRLMGGVTLVNVRTVHAT FGVVTILVAYGFFRSFWNPRLALAAAALLGSNHALLGISRMAMRENLIVLVECAALALILKGVREKNPLLLYLGGGAAGF SLYGYLPGRVVILLGLLFGGLYLLLGREDLQGENKQANPFWTLAKLTVPAALGFFLVAAPILVATATAPPVSAEYARQQF LFFPEGRALQQMWVNAATPAEAVWRNIRNGLSMFNDPSQHDRGYIYPNYGHAFVDPLTGVLIWLGLGSGLYRLLKGRSQP HDWLCLGSFLFLYLLFSLAITKAPNYTRLLVILPFVAYLTLEGIQVLAGLLERWGSRAGSWLPAAAMAGAILLIGGWNLA IFGDFVHKGWTQGNDVGATGRYVAARQMDPDHRFYLAASTAYPYFSWGEPPYWQSWIQFFAGPEQEVQVFSPEALPTQDL QPPFTLFLNEGVWDQQGAALQRRFPQGQLHRIPAERGLWAFEVGDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67248; Mature: 67117
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVWDTLATSRRPALLGSGLGLGIALTLGYGLFGYHVLQVGIWLLSILLVGLYVAQFPPA CCCHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPPWDPTRLRWRQELLHLGLLALVFAPIYLYDLANIPFQINTDEIVITSMARRASAVRYP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCC DIFGLMPEYFYFPRFMFSLFGGLTRLMGGVTLVNVRTVHATFGVVTILVAYGFFRSFWNP HHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCH RLALAAAALLGSNHALLGISRMAMRENLIVLVECAALALILKGVREKNPLLLYLGGGAAG HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCC FSLYGYLPGRVVILLGLLFGGLYLLLGREDLQGENKQANPFWTLAKLTVPAALGFFLVAA CHHEECCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH PILVATATAPPVSAEYARQQFLFFPEGRALQQMWVNAATPAEAVWRNIRNGLSMFNDPSQ HHHHHCCCCCCCCHHHHHHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC HDRGYIYPNYGHAFVDPLTGVLIWLGLGSGLYRLLKGRSQPHDWLCLGSFLFLYLLFSLA CCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ITKAPNYTRLLVILPFVAYLTLEGIQVLAGLLERWGSRAGSWLPAAAMAGAILLIGGWNL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCC AIFGDFVHKGWTQGNDVGATGRYVAARQMDPDHRFYLAASTAYPYFSWGEPPYWQSWIQF EEEHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH FAGPEQEVQVFSPEALPTQDLQPPFTLFLNEGVWDQQGAALQRRFPQGQLHRIPAERGLW HCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCHHCCCCHHCCEE AFEVGDP EEECCCC >Mature Secondary Structure AVWDTLATSRRPALLGSGLGLGIALTLGYGLFGYHVLQVGIWLLSILLVGLYVAQFPPA CCHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPPWDPTRLRWRQELLHLGLLALVFAPIYLYDLANIPFQINTDEIVITSMARRASAVRYP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCC DIFGLMPEYFYFPRFMFSLFGGLTRLMGGVTLVNVRTVHATFGVVTILVAYGFFRSFWNP HHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCH RLALAAAALLGSNHALLGISRMAMRENLIVLVECAALALILKGVREKNPLLLYLGGGAAG HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCC FSLYGYLPGRVVILLGLLFGGLYLLLGREDLQGENKQANPFWTLAKLTVPAALGFFLVAA CHHEECCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH PILVATATAPPVSAEYARQQFLFFPEGRALQQMWVNAATPAEAVWRNIRNGLSMFNDPSQ HHHHHCCCCCCCCHHHHHHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC HDRGYIYPNYGHAFVDPLTGVLIWLGLGSGLYRLLKGRSQPHDWLCLGSFLFLYLLFSLA CCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ITKAPNYTRLLVILPFVAYLTLEGIQVLAGLLERWGSRAGSWLPAAAMAGAILLIGGWNL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCC AIFGDFVHKGWTQGNDVGATGRYVAARQMDPDHRFYLAASTAYPYFSWGEPPYWQSWIQF EEEHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH FAGPEQEVQVFSPEALPTQDLQPPFTLFLNEGVWDQQGAALQRRFPQGQLHRIPAERGLW HCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCHHCCCCHHCCEE AFEVGDP EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA