Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605738

Identifier: 86605738

GI number: 86605738

Start: 1063841

End: 1064101

Strand: Reverse

Name: 86605738

Synonym: CYA_1043

Alternate gene names: NA

Gene position: 1064101-1063841 (Counterclockwise)

Preceding gene: 86605739

Following gene: 86605737

Centisome position: 36.28

GC content: 60.15

Gene sequence:

>261_bases
ATGTTGCAAGACCCGAAGTTGATCCGGCACTATCAGGCTTTGACCGACGCGCTGGTGGACAGTTGGCATCGCGGCTATCG
GCGCACTGACGAGCTGCGCCTGCTGGTGGATGGCTACCTGCTGGCCCTGCGAACTGGCAAGCAATTGCAGCCTTTTGAGA
TCTACCGCCTTGAAGACGAGGTCAACCGCTTCCTCTACGACCCCTCCAACTTCGTGGAGCCGGAACTGGAGCGGGAGACC
GAGGCGATGCGGGGCTATTGA

Upstream 100 bases:

>100_bases
GTGACAGTTTAAGACAACACAGCTTCTCATCCCTTCGCAACTCCTCCTCACAAACAGACATCAAACGTTAGGATAGAAGC
AAGCAGGGCAAGGGAACCCC

Downstream 100 bases:

>100_bases
TATTGCTTATTGATATTGCATAGAGAGGGGCCGGGGGTGAGGGATCGAACACCGGCAGAGGCCTGGTAGGCTGGGGTCAG
TGCTGTTCCTCACTCCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MLQDPKLIRHYQALTDALVDSWHRGYRRTDELRLLVDGYLLALRTGKQLQPFEIYRLEDEVNRFLYDPSNFVEPELERET
EAMRGY

Sequences:

>Translated_86_residues
MLQDPKLIRHYQALTDALVDSWHRGYRRTDELRLLVDGYLLALRTGKQLQPFEIYRLEDEVNRFLYDPSNFVEPELERET
EAMRGY
>Mature_86_residues
MLQDPKLIRHYQALTDALVDSWHRGYRRTDELRLLVDGYLLALRTGKQLQPFEIYRLEDEVNRFLYDPSNFVEPELERET
EAMRGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10375; Mature: 10375

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQDPKLIRHYQALTDALVDSWHRGYRRTDELRLLVDGYLLALRTGKQLQPFEIYRLEDE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHH
VNRFLYDPSNFVEPELERETEAMRGY
HHHHHCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLQDPKLIRHYQALTDALVDSWHRGYRRTDELRLLVDGYLLALRTGKQLQPFEIYRLEDE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHH
VNRFLYDPSNFVEPELERETEAMRGY
HHHHHCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA