| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605731
Identifier: 86605731
GI number: 86605731
Start: 1055040
End: 1055432
Strand: Reverse
Name: 86605731
Synonym: CYA_1035
Alternate gene names: NA
Gene position: 1055432-1055040 (Counterclockwise)
Preceding gene: 86605736
Following gene: 86605730
Centisome position: 35.99
GC content: 62.09
Gene sequence:
>393_bases GTGCTTGTCGGCTTTTTCAACGACCGCCTGTTGCCGGAGCGCTGCCACGTTCGGCCCGAAGCTCTGCCGGAGTGGATGGC TCAGGTGTGGGCCGGCTATCTGCGCTATCGCAAAGCCTCTCGTCCGGGAGCGATTCAGTTTCGCGGCTTAACGGTGGATC CCGGCCAAGAGGGATCCTCAGCTCACCTTATTGGGGCTGGCCCGCTCCGCTACCGTGGCTGCCCTCTGGAGACAGTTGCC CGGGATGCCGTCCAACCCTTTGGCAAAACCCCTTTTGTGCCCCCCTACCAGCGGCTGCTCAATACGCTGCGCTTGAAGTT GAGCCTGGCCGATGTCGATAGCTATTCGGTCACGCCGGCCCTACAGCGGGTTTACCGCGGCCAAGAGTTGTAA
Upstream 100 bases:
>100_bases CGGCAACTCCCACCCACAGTGATTTTTGGCCTCCGCCATGAAGATTTCGCCATCTCTCGCTGCCCGCCTCTTGGGAGCTG TTCTCTGGCAAGCTTGGTCT
Downstream 100 bases:
>100_bases ACTACCCGGCTCCGACTGCCCCCCGTATACGGGGGGCAGGGGGATGTAGGGTGGCCGGTTTACAGCAGCCCCCAATAATG CAATGACATAGGCGCTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MLVGFFNDRLLPERCHVRPEALPEWMAQVWAGYLRYRKASRPGAIQFRGLTVDPGQEGSSAHLIGAGPLRYRGCPLETVA RDAVQPFGKTPFVPPYQRLLNTLRLKLSLADVDSYSVTPALQRVYRGQEL
Sequences:
>Translated_130_residues MLVGFFNDRLLPERCHVRPEALPEWMAQVWAGYLRYRKASRPGAIQFRGLTVDPGQEGSSAHLIGAGPLRYRGCPLETVA RDAVQPFGKTPFVPPYQRLLNTLRLKLSLADVDSYSVTPALQRVYRGQEL >Mature_130_residues MLVGFFNDRLLPERCHVRPEALPEWMAQVWAGYLRYRKASRPGAIQFRGLTVDPGQEGSSAHLIGAGPLRYRGCPLETVA RDAVQPFGKTPFVPPYQRLLNTLRLKLSLADVDSYSVTPALQRVYRGQEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14639; Mature: 14639
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGFFNDRLLPERCHVRPEALPEWMAQVWAGYLRYRKASRPGAIQFRGLTVDPGQEGSS CEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEECCCCCCCC AHLIGAGPLRYRGCPLETVARDAVQPFGKTPFVPPYQRLLNTLRLKLSLADVDSYSVTPA EEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH LQRVYRGQEL HHHHHCCCCC >Mature Secondary Structure MLVGFFNDRLLPERCHVRPEALPEWMAQVWAGYLRYRKASRPGAIQFRGLTVDPGQEGSS CEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEECCCCCCCC AHLIGAGPLRYRGCPLETVARDAVQPFGKTPFVPPYQRLLNTLRLKLSLADVDSYSVTPA EEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH LQRVYRGQEL HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA