| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yfeW [H]
Identifier: 86605682
GI number: 86605682
Start: 996509
End: 997660
Strand: Reverse
Name: yfeW [H]
Synonym: CYA_0983
Alternate gene names: 86605682
Gene position: 997660-996509 (Counterclockwise)
Preceding gene: 86605685
Following gene: 86605681
Centisome position: 34.02
GC content: 62.85
Gene sequence:
>1152_bases ATGGGCTGGGATCCGACCTTGCTGGAGGGGCTGCTCAACTCCACCATTCCCCACCTTTTCCCTGCTGCCCAGGTGGTCAT CCGCCACAAGGGAAGGTGTATCTACTCAAGGGCGGCAGGTTATCTCGACCCTGAGACCCGGCGCCAACCGACAACCTCGG CCACCCGTTTTGACCTGGCCTCGCTGACCAAGCTGTACACCGCCACCGCCTGCATGGCCCTGGTGGAAGCCGGAGCGTTG CTGTTGGATCAACCGGTGAGTCTCCTGTTGCCGGAGTTTCAGGGATCCCGCCCCATTGCCCCCTATGAAGATCCTCTGCA ACCAGGGGAATGGATAGCTGCGGAGCCGGAGTCCTTGGGCCAGCTTATGGCAGCAGAACAGGTGACGGTGCGACAGTTGC TGGCCCACACCGCCGGTTTGCCCGCCTGGCGGCCCCTGTTTCGACAGCCCGATGCCGAATCGGCCCGGCACATGGCCCTG CACACCTTTTTGGCCTACAGGCCGGGATCCCGCAGAGTCTACAGCGATCTTGGATTGATCCTGCTGGGGCTGGCTTTGGA ACGTCTGAGCGGAACCCCTCTGGATCAGATCTTGCATGCCCGGATCTTGCAGCCTCTGGGCCTGAGCCAAACTCAGTTTT ATCCAGGGGATCCTTTCGACCCACCCCCTGTCTCTGTCTCTTGTGCCCCCACCGAGCTGTGTCCTTGGCGAAAGCGCCGC CTACAGGGGCAGGTTCACGACGAAAATGCCGCCCGCCTGGGCGGGATCGCCGGCCATGCCGGACTATTCGCCACGGCAGA GGAAGTAGCCGCTTTCGGAGAGAGTTTTTTGACGGGATCCCTGTTGCAGCCGCAGACGGTGAGGGAAATGACCCGCGAGC AGTTGCCTCAGCAAGGGGATGCCCACCGCTGTCACGAGCGCCGGGGTTTGGGGTTTGCCTTGCGCTCCCCGGATCCCTTG GCCAGCAGCTACCCGTTCAGCCCCAGCGCCTTCGGCCACACCGGCTTCACCGGACCCTCCCTGTGGATCGATCCAGAGCG GGAGCTGGTGGTGACGCTGCTCACCAACGCCGTCTACCACGGTCGGCAGGAGAACGGATTCCAGGCTTTCCGGGTTGCCT TCCATCAGGCCATCCTAGAGGGGCTTTCTTGA
Upstream 100 bases:
>100_bases CGTGGTGGCATCCTAGCTGGGGAAGCGGTAGGCTTTTGTAAACACCGTTACAAGTTGTTTGTTGGACTGGGGATCCTCAA GCCGGGAGGAGAGGAGGCAG
Downstream 100 bases:
>100_bases TCATTGAGTCCCTGACCGTTCCCGCTAGGGTGCCGTAGGCATAACCGAGGCTGAGGTGGACGAGACCTTTTACCGACAGT TGGCAGACATGCTGATACAT
Product: carboxylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MGWDPTLLEGLLNSTIPHLFPAAQVVIRHKGRCIYSRAAGYLDPETRRQPTTSATRFDLASLTKLYTATACMALVEAGAL LLDQPVSLLLPEFQGSRPIAPYEDPLQPGEWIAAEPESLGQLMAAEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMAL HTFLAYRPGSRRVYSDLGLILLGLALERLSGTPLDQILHARILQPLGLSQTQFYPGDPFDPPPVSVSCAPTELCPWRKRR LQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGDAHRCHERRGLGFALRSPDPL ASSYPFSPSAFGHTGFTGPSLWIDPERELVVTLLTNAVYHGRQENGFQAFRVAFHQAILEGLS
Sequences:
>Translated_383_residues MGWDPTLLEGLLNSTIPHLFPAAQVVIRHKGRCIYSRAAGYLDPETRRQPTTSATRFDLASLTKLYTATACMALVEAGAL LLDQPVSLLLPEFQGSRPIAPYEDPLQPGEWIAAEPESLGQLMAAEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMAL HTFLAYRPGSRRVYSDLGLILLGLALERLSGTPLDQILHARILQPLGLSQTQFYPGDPFDPPPVSVSCAPTELCPWRKRR LQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGDAHRCHERRGLGFALRSPDPL ASSYPFSPSAFGHTGFTGPSLWIDPERELVVTLLTNAVYHGRQENGFQAFRVAFHQAILEGLS >Mature_382_residues GWDPTLLEGLLNSTIPHLFPAAQVVIRHKGRCIYSRAAGYLDPETRRQPTTSATRFDLASLTKLYTATACMALVEAGALL LDQPVSLLLPEFQGSRPIAPYEDPLQPGEWIAAEPESLGQLMAAEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMALH TFLAYRPGSRRVYSDLGLILLGLALERLSGTPLDQILHARILQPLGLSQTQFYPGDPFDPPPVSVSCAPTELCPWRKRRL QGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGDAHRCHERRGLGFALRSPDPLA SSYPFSPSAFGHTGFTGPSLWIDPERELVVTLLTNAVYHGRQENGFQAFRVAFHQAILEGLS
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0214 family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=374, Percent_Identity=29.144385026738, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR022849 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 42001; Mature: 41870
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWDPTLLEGLLNSTIPHLFPAAQVVIRHKGRCIYSRAAGYLDPETRRQPTTSATRFDLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCHHCCCCCCCHHHHHHH SLTKLYTATACMALVEAGALLLDQPVSLLLPEFQGSRPIAPYEDPLQPGEWIAAEPESLG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHH QLMAAEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMALHTFLAYRPGSRRVYSDLGLI HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LLGLALERLSGTPLDQILHARILQPLGLSQTQFYPGDPFDPPPVSVSCAPTELCPWRKRR HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCHHHHHH LQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGD CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC AHRCHERRGLGFALRSPDPLASSYPFSPSAFGHTGFTGPSLWIDPERELVVTLLTNAVYH HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHC GRQENGFQAFRVAFHQAILEGLS CCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GWDPTLLEGLLNSTIPHLFPAAQVVIRHKGRCIYSRAAGYLDPETRRQPTTSATRFDLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCHHCCCCCCCHHHHHHH SLTKLYTATACMALVEAGALLLDQPVSLLLPEFQGSRPIAPYEDPLQPGEWIAAEPESLG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHH QLMAAEQVTVRQLLAHTAGLPAWRPLFRQPDAESARHMALHTFLAYRPGSRRVYSDLGLI HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LLGLALERLSGTPLDQILHARILQPLGLSQTQFYPGDPFDPPPVSVSCAPTELCPWRKRR HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHCCHHHHHH LQGQVHDENAARLGGIAGHAGLFATAEEVAAFGESFLTGSLLQPQTVREMTREQLPQQGD CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC AHRCHERRGLGFALRSPDPLASSYPFSPSAFGHTGFTGPSLWIDPERELVVTLLTNAVYH HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHC GRQENGFQAFRVAFHQAILEGLS CCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA