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The map label for this gene is 86605685

Identifier: 86605685

GI number: 86605685

Start: 1000284

End: 1001570

Strand: Reverse

Name: 86605685

Synonym: CYA_0986

Alternate gene names: NA

Gene position: 1001570-1000284 (Counterclockwise)

Preceding gene: 86605686

Following gene: 86605682

Centisome position: 34.15

GC content: 62.55

Gene sequence:

>1287_bases
ATGCCACAAGAGCGGATCCCGTTGGAAGAGATGACCATCCGGCAGTTGCGGGAAGAAGCTGCCCGCTATCAGATCCCCAA
GTACAGCCGCATGACCAAAGACCAGCTGATTGAGGCCATTCGAGAGGCCCAAGTCAAAGCTGGCTGCCCTGTCGATGCCA
TGCCGGAGCCCAAGGGGCAAGAATCGGTCACCCAAACGAAGTTTAGGGGTCAAGAGGTTGCCGGCAAGACGGATCTGGCC
GATGTGGACAAAGGGCTGGGGGATCTGCCGGAGGGCTATGGGGAAAGCCGCATCGTTTTGCTGCCGCGGGATCCCCAGTG
GGCCTACGCCTATTGGGATGTGCCCAACGAGGCTAAAGAAAGCAAGCGCCGCGAGGGCGGCCAACAGTTGGCGCTGCGCC
TCTACGATGTGACGGATATCGATTTCAGCTACCAGCCGGCCCACAGCATGCAGGAGTACCCCTGTGATGAGTTGGCGCGG
GAGTGGTATTTGCCGATCCCGGTGAGCGATCGTTCCTACATTGTGGAAATTGGCTACCGGACGGCAGATGGCCGCTGGCT
GATGTTGGCCCGCTCGGCGGCGGTGATGGTGCCGCCAGTCTTTCCCTCCGACTGGTTTGAAGAGCACTTCCTGACGGTGC
CCTTTGACATGCCCCTCCAGGGCCGCACCCTCTACCAGCTCACCGAGCCCTACAAGCGCAGCGCCACCGGCATGGGCGTG
GTGGCCTACAAAGGCGACGAGCCGCAGCGGCAGAGGACGGCGGATCCCTTCCTGGAGATGGTGGGCGGCTTCGAGGCGAT
GCGGGTGGCGGGATCCCTGTTTGGCAGCCACCAGATGGGCAGCCGTCAACTGGTGCCCGAGCAGGCCATCAGCTCGTTTA
TTATCCCGTCGGGCGTGGGCATGATGGGAATGGCTATGGCCATGGCCGAAGTGCCTGCTGCTCCCTGGATGGCTTCCGGG
TCGGGACTAGGGCTGTTCTCCGGCGCTTCCGAAGTCCTGCCGCGGCGCTCCCGCAAGTTCTGGCTGGTGGCCGATGCCGA
GCTGATTGTCTATGGGGCCACGGAGCCCGATGCCACCGTCACCATCGGCGGGCGCAAGATCCAGCTCAACCCCGATGGCA
CCTTCCGCTTCCACATGGCTTTCCCGGATGGCAACATCGACTTCCCCATCTTTGCTGTGGCTGCCGACGGCGAGCAAAAC
CGGGAGATCCACATGACCTTCGACCGCCGCACCCTCTCCCGCCGCACCAACACCAAGGAAGAGGCTATCGAAGAACTGTT
GCCCTGA

Upstream 100 bases:

>100_bases
GGCCAGGGGTTGCCCTTAGCCACAAGCTGGGATCGGCCTTTGGGTTAGCCAGTGGAGTGTGCGCACAAGCCCGATCTGTT
GAGGACAGGAGACCCCGACC

Downstream 100 bases:

>100_bases
AGGATCCAACCTTTCCCTTCTTGCCCCCTGGAGCTGGCCGGGGGGCTTTCTTTCCTGGGCTGGAGAGCTTGACTCTAGTC
ATCGAAACAGGGGATCCCAG

Product: Rho termination factor domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MPQERIPLEEMTIRQLREEAARYQIPKYSRMTKDQLIEAIREAQVKAGCPVDAMPEPKGQESVTQTKFRGQEVAGKTDLA
DVDKGLGDLPEGYGESRIVLLPRDPQWAYAYWDVPNEAKESKRREGGQQLALRLYDVTDIDFSYQPAHSMQEYPCDELAR
EWYLPIPVSDRSYIVEIGYRTADGRWLMLARSAAVMVPPVFPSDWFEEHFLTVPFDMPLQGRTLYQLTEPYKRSATGMGV
VAYKGDEPQRQRTADPFLEMVGGFEAMRVAGSLFGSHQMGSRQLVPEQAISSFIIPSGVGMMGMAMAMAEVPAAPWMASG
SGLGLFSGASEVLPRRSRKFWLVADAELIVYGATEPDATVTIGGRKIQLNPDGTFRFHMAFPDGNIDFPIFAVAADGEQN
REIHMTFDRRTLSRRTNTKEEAIEELLP

Sequences:

>Translated_428_residues
MPQERIPLEEMTIRQLREEAARYQIPKYSRMTKDQLIEAIREAQVKAGCPVDAMPEPKGQESVTQTKFRGQEVAGKTDLA
DVDKGLGDLPEGYGESRIVLLPRDPQWAYAYWDVPNEAKESKRREGGQQLALRLYDVTDIDFSYQPAHSMQEYPCDELAR
EWYLPIPVSDRSYIVEIGYRTADGRWLMLARSAAVMVPPVFPSDWFEEHFLTVPFDMPLQGRTLYQLTEPYKRSATGMGV
VAYKGDEPQRQRTADPFLEMVGGFEAMRVAGSLFGSHQMGSRQLVPEQAISSFIIPSGVGMMGMAMAMAEVPAAPWMASG
SGLGLFSGASEVLPRRSRKFWLVADAELIVYGATEPDATVTIGGRKIQLNPDGTFRFHMAFPDGNIDFPIFAVAADGEQN
REIHMTFDRRTLSRRTNTKEEAIEELLP
>Mature_427_residues
PQERIPLEEMTIRQLREEAARYQIPKYSRMTKDQLIEAIREAQVKAGCPVDAMPEPKGQESVTQTKFRGQEVAGKTDLAD
VDKGLGDLPEGYGESRIVLLPRDPQWAYAYWDVPNEAKESKRREGGQQLALRLYDVTDIDFSYQPAHSMQEYPCDELARE
WYLPIPVSDRSYIVEIGYRTADGRWLMLARSAAVMVPPVFPSDWFEEHFLTVPFDMPLQGRTLYQLTEPYKRSATGMGVV
AYKGDEPQRQRTADPFLEMVGGFEAMRVAGSLFGSHQMGSRQLVPEQAISSFIIPSGVGMMGMAMAMAEVPAAPWMASGS
GLGLFSGASEVLPRRSRKFWLVADAELIVYGATEPDATVTIGGRKIQLNPDGTFRFHMAFPDGNIDFPIFAVAADGEQNR
EIHMTFDRRTLSRRTNTKEEAIEELLP

Specific function: Unknown

COG id: COG3330

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48062; Mature: 47931

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQERIPLEEMTIRQLREEAARYQIPKYSRMTKDQLIEAIREAQVKAGCPVDAMPEPKGQ
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ESVTQTKFRGQEVAGKTDLADVDKGLGDLPEGYGESRIVLLPRDPQWAYAYWDVPNEAKE
HHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHH
SKRREGGQQLALRLYDVTDIDFSYQPAHSMQEYPCDELAREWYLPIPVSDRSYIVEIGYR
HHHHCCCCEEEEEEEEEEECCCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCEEEEEEEE
TADGRWLMLARSAAVMVPPVFPSDWFEEHFLTVPFDMPLQGRTLYQLTEPYKRSATGMGV
ECCCCEEEEECCCEEEECCCCCCCHHHHCCEECCCCCCCCCCCHHHHHCCHHHCCCCCEE
VAYKGDEPQRQRTADPFLEMVGGFEAMRVAGSLFGSHQMGSRQLVPEQAISSFIIPSGVG
EEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCH
MMGMAMAMAEVPAAPWMASGSGLGLFSGASEVLPRRSRKFWLVADAELIVYGATEPDATV
HHHHHHHHHHCCCCCCEECCCCCEEECCHHHHCCCCCCEEEEEECCEEEEEECCCCCCEE
TIGGRKIQLNPDGTFRFHMAFPDGNIDFPIFAVAADGEQNREIHMTFDRRTLSRRTNTKE
EECCEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECHHHHHHCCCCHH
EAIEELLP
HHHHHHCC
>Mature Secondary Structure 
PQERIPLEEMTIRQLREEAARYQIPKYSRMTKDQLIEAIREAQVKAGCPVDAMPEPKGQ
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ESVTQTKFRGQEVAGKTDLADVDKGLGDLPEGYGESRIVLLPRDPQWAYAYWDVPNEAKE
HHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHH
SKRREGGQQLALRLYDVTDIDFSYQPAHSMQEYPCDELAREWYLPIPVSDRSYIVEIGYR
HHHHCCCCEEEEEEEEEEECCCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCEEEEEEEE
TADGRWLMLARSAAVMVPPVFPSDWFEEHFLTVPFDMPLQGRTLYQLTEPYKRSATGMGV
ECCCCEEEEECCCEEEECCCCCCCHHHHCCEECCCCCCCCCCCHHHHHCCHHHCCCCCEE
VAYKGDEPQRQRTADPFLEMVGGFEAMRVAGSLFGSHQMGSRQLVPEQAISSFIIPSGVG
EEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCH
MMGMAMAMAEVPAAPWMASGSGLGLFSGASEVLPRRSRKFWLVADAELIVYGATEPDATV
HHHHHHHHHHCCCCCCEECCCCCEEECCHHHHCCCCCCEEEEEECCEEEEEECCCCCCEE
TIGGRKIQLNPDGTFRFHMAFPDGNIDFPIFAVAADGEQNREIHMTFDRRTLSRRTNTKE
EECCEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECHHHHHHCCCCHH
EAIEELLP
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA