| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605667
Identifier: 86605667
GI number: 86605667
Start: 978380
End: 979045
Strand: Reverse
Name: 86605667
Synonym: CYA_0966
Alternate gene names: NA
Gene position: 979045-978380 (Counterclockwise)
Preceding gene: 86605669
Following gene: 86605666
Centisome position: 33.38
GC content: 59.31
Gene sequence:
>666_bases ATGACACTTGTTTCCATCACATCGGCAGCAGAGGCTCAGGAATGGCGGGAACTCCGCCAGTGGGCCGAAGAGCACTACCG CTCTCGTACGTTTCCTAAAGATGTGCGCATTCCAACTCGTCCGGGATTGGTGTACATCCCCCAAGAGGGCGTGGTGCGCC TGGTCAGCCAAACGCCGGAGCGGCGGGAGGTTTTTGTCGGGTTTATCACGCCCGGGGTGCCCTTTGAGCTGAGCAACCCG GAGCGCTTTGAGCTAAAAGCCTGCACCCATGTCGATCGCACGACGGTGATGTGGTTTTACTGGCAGGATTTGGAGCAGTG GCCCTATCTGCACCAGAAAATTCAAGAAAGCTTCCGCCAGCAACTGCAACGCAAGTTGCTCTGGCTGGGCAACTTGGGCC AGCGTCGCGCCATCGACCGCCTGAAGGGCTTTTTGACCTTGTTAATCGACGAGTATGGGCAGCCCTGTGAGCAGGGGATG TACCTCCCCTGGCCCCTCACCCACGCCCAGATCGGGGATGCCATTGGTGCCACCCGCGTGACGGTTACTCGCCTGCTGGG ATCCCTGCGCTCGAAGGGGTTTGTGCAGGTGCTGGATCAAAACTTAATCTGCATCCCCAACGGGGTGAAGCTGCAGCCGA CGCCAAAAAAGGCGGCCAGCGCCTGA
Upstream 100 bases:
>100_bases CGGACGCGAAGGCGAAAGCGTTGTGTTGCAACAGTAGCCAGGTAAAGCTGGGGAGTCTGTAAAACCCATCAGGTCGCTCG AGCGACAGGAAGTTGATCCC
Downstream 100 bases:
>100_bases CCCTGCGATTTCAGTGCAATTTCAAAGTGCTCTGGTAAGCCGATGGGCCTACAGCTCCACTGTCGTGTTTGGGGAGAAGG GATCCCTTCGCTGCCCATCC
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family Protein; Transcriptional Regulator Crp/Fnr Family; Crp Family Transcriptional Regulatory Protein; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator CRP Family Protein; Two-Component Response Regulator; CRP Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTLVSITSAAEAQEWRELRQWAEEHYRSRTFPKDVRIPTRPGLVYIPQEGVVRLVSQTPERREVFVGFITPGVPFELSNP ERFELKACTHVDRTTVMWFYWQDLEQWPYLHQKIQESFRQQLQRKLLWLGNLGQRRAIDRLKGFLTLLIDEYGQPCEQGM YLPWPLTHAQIGDAIGATRVTVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA
Sequences:
>Translated_221_residues MTLVSITSAAEAQEWRELRQWAEEHYRSRTFPKDVRIPTRPGLVYIPQEGVVRLVSQTPERREVFVGFITPGVPFELSNP ERFELKACTHVDRTTVMWFYWQDLEQWPYLHQKIQESFRQQLQRKLLWLGNLGQRRAIDRLKGFLTLLIDEYGQPCEQGM YLPWPLTHAQIGDAIGATRVTVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA >Mature_220_residues TLVSITSAAEAQEWRELRQWAEEHYRSRTFPKDVRIPTRPGLVYIPQEGVVRLVSQTPERREVFVGFITPGVPFELSNPE RFELKACTHVDRTTVMWFYWQDLEQWPYLHQKIQESFRQQLQRKLLWLGNLGQRRAIDRLKGFLTLLIDEYGQPCEQGMY LPWPLTHAQIGDAIGATRVTVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25572; Mature: 25441
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVSITSAAEAQEWRELRQWAEEHYRSRTFPKDVRIPTRPGLVYIPQEGVVRLVSQTPE CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCC RREVFVGFITPGVPFELSNPERFELKACTHVDRTTVMWFYWQDLEQWPYLHQKIQESFRQ CCEEEEEEECCCCCEECCCCCCEEEHHHCCCCCCEEEEEEECCHHHCHHHHHHHHHHHHH QLQRKLLWLGNLGQRRAIDRLKGFLTLLIDEYGQPCEQGMYLPWPLTHAQIGDAIGATRV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHH TVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA HHHHHHHHHHCCCHHHHHCCCEEECCCCCEECCCCHHHCCC >Mature Secondary Structure TLVSITSAAEAQEWRELRQWAEEHYRSRTFPKDVRIPTRPGLVYIPQEGVVRLVSQTPE EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCC RREVFVGFITPGVPFELSNPERFELKACTHVDRTTVMWFYWQDLEQWPYLHQKIQESFRQ CCEEEEEEECCCCCEECCCCCCEEEHHHCCCCCCEEEEEEECCHHHCHHHHHHHHHHHHH QLQRKLLWLGNLGQRRAIDRLKGFLTLLIDEYGQPCEQGMYLPWPLTHAQIGDAIGATRV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHH TVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA HHHHHHHHHHCCCHHHHHCCCEEECCCCCEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA