| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is bioH [C]
Identifier: 86605666
GI number: 86605666
Start: 977468
End: 978337
Strand: Reverse
Name: bioH [C]
Synonym: CYA_0964
Alternate gene names: 86605666
Gene position: 978337-977468 (Counterclockwise)
Preceding gene: 86605667
Following gene: 86605664
Centisome position: 33.36
GC content: 64.71
Gene sequence:
>870_bases ATGGGCCTACAGCTCCACTGTCGTGTTTGGGGAGAAGGGATCCCTTCGCTGCCCATCCTGCTGCTCCACGGCCATCCGGG CAATGCCGACTGCATGGAAGTTTTTGCCGAGGCGGTGGCGGGGATGCACCCCTGTGTGGCGCCGGATCTGCGCGGCTACG GGCGTTCGCAGGTGCGGGATCCCTTTGAGATGTCGGCCCACCTGGAGGATTTGCAGGAGCTGCTGGATCGCCTGGGCTGG CGGGAGTGCCTGCTGCTGGGCTGGTCGCTGGGCGGGATCCTGGCCCTGGAGCTGGCCTTGCGGCTGCCGGGACGGGTCAA AGGCTTGGTCTTGGTGGCCAGCGCCGCCTGTCCTCGTAGCAACCATCCCCCCACCGATTTTTGGGATCAGCTCAACACTG GCATTGCCTCGCTGCTCAACTGGCTCTGGCCCGGCTGGGAGTGGAACATCGACACCTTTGGCCGCCGCTCTCTCTACCGC TACCTAATCCAGAGACATACCCCGAGAACCTATCGCTACCTGGCCCAGGCAGCTTTGCCGGCTTACCTGCATACCTCTCC TCAGGCTCGCCAAGCCCTACGCGCTGCCCTTCGACAGGGCTACAACCGCGAGGGAGAGCTGCAGCAGCTGCACATACCTG TGTTGCTCATGGCTGGCGAGCGGGATCGCCACATCACTGCCGCCAGCAGCCTGGCCACTGCCCGCGCCTTGCCCCAGTGC ACCTGCATTGTCTATCCCCATGTGGCCCACCTCTTCCCCTGGGAGATCCCCGACCAGGTAGGACGGGATCTGCGGCGCTG GCTTAGCGCTCAAGACTGGGACAAGGGGGACTCTCCCAACCCACCCTCAGCGGAAGAAGCCGCAGCCTGA
Upstream 100 bases:
>100_bases CTGCATCCCCAACGGGGTGAAGCTGCAGCCGACGCCAAAAAAGGCGGCCAGCGCCTGACCCTGCGATTTCAGTGCAATTT CAAAGTGCTCTGGTAAGCCG
Downstream 100 bases:
>100_bases ACCTGGGCCAGCTTGCGCAGCCGAGCAAAGGCCTCTTCCTCCAGCCGGATTTGCTGCTGCTGTTGTTCTTCCGGGGTGCG CAGGCGTTTTCCCAGCGGCT
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Esterase; Alpha/Beta Hydrolase Superfamily Protein; Abhydrolase Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MGLQLHCRVWGEGIPSLPILLLHGHPGNADCMEVFAEAVAGMHPCVAPDLRGYGRSQVRDPFEMSAHLEDLQELLDRLGW RECLLLGWSLGGILALELALRLPGRVKGLVLVASAACPRSNHPPTDFWDQLNTGIASLLNWLWPGWEWNIDTFGRRSLYR YLIQRHTPRTYRYLAQAALPAYLHTSPQARQALRAALRQGYNREGELQQLHIPVLLMAGERDRHITAASSLATARALPQC TCIVYPHVAHLFPWEIPDQVGRDLRRWLSAQDWDKGDSPNPPSAEEAAA
Sequences:
>Translated_289_residues MGLQLHCRVWGEGIPSLPILLLHGHPGNADCMEVFAEAVAGMHPCVAPDLRGYGRSQVRDPFEMSAHLEDLQELLDRLGW RECLLLGWSLGGILALELALRLPGRVKGLVLVASAACPRSNHPPTDFWDQLNTGIASLLNWLWPGWEWNIDTFGRRSLYR YLIQRHTPRTYRYLAQAALPAYLHTSPQARQALRAALRQGYNREGELQQLHIPVLLMAGERDRHITAASSLATARALPQC TCIVYPHVAHLFPWEIPDQVGRDLRRWLSAQDWDKGDSPNPPSAEEAAA >Mature_288_residues GLQLHCRVWGEGIPSLPILLLHGHPGNADCMEVFAEAVAGMHPCVAPDLRGYGRSQVRDPFEMSAHLEDLQELLDRLGWR ECLLLGWSLGGILALELALRLPGRVKGLVLVASAACPRSNHPPTDFWDQLNTGIASLLNWLWPGWEWNIDTFGRRSLYRY LIQRHTPRTYRYLAQAALPAYLHTSPQARQALRAALRQGYNREGELQQLHIPVLLMAGERDRHITAASSLATARALPQCT CIVYPHVAHLFPWEIPDQVGRDLRRWLSAQDWDKGDSPNPPSAEEAAA
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32416; Mature: 32284
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLQLHCRVWGEGIPSLPILLLHGHPGNADCMEVFAEAVAGMHPCVAPDLRGYGRSQVRD CCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCHHHCCC PFEMSAHLEDLQELLDRLGWRECLLLGWSLGGILALELALRLPGRVKGLVLVASAACPRS HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCC NHPPTDFWDQLNTGIASLLNWLWPGWEWNIDTFGRRSLYRYLIQRHTPRTYRYLAQAALP CCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AYLHTSPQARQALRAALRQGYNREGELQQLHIPVLLMAGERDRHITAASSLATARALPQC HHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCE TCIVYPHVAHLFPWEIPDQVGRDLRRWLSAQDWDKGDSPNPPSAEEAAA EEEECHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure GLQLHCRVWGEGIPSLPILLLHGHPGNADCMEVFAEAVAGMHPCVAPDLRGYGRSQVRD CCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCHHHCCC PFEMSAHLEDLQELLDRLGWRECLLLGWSLGGILALELALRLPGRVKGLVLVASAACPRS HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCC NHPPTDFWDQLNTGIASLLNWLWPGWEWNIDTFGRRSLYRYLIQRHTPRTYRYLAQAALP CCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AYLHTSPQARQALRAALRQGYNREGELQQLHIPVLLMAGERDRHITAASSLATARALPQC HHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCE TCIVYPHVAHLFPWEIPDQVGRDLRRWLSAQDWDKGDSPNPPSAEEAAA EEEECHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA