| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605624
Identifier: 86605624
GI number: 86605624
Start: 931131
End: 931571
Strand: Reverse
Name: 86605624
Synonym: CYA_0922
Alternate gene names: NA
Gene position: 931571-931131 (Counterclockwise)
Preceding gene: 86605626
Following gene: 86605623
Centisome position: 31.76
GC content: 62.36
Gene sequence:
>441_bases ATGGAACTCTCTTACCGTGGCGTTGGTTACACCCACTCGCCGGCGACGGTGACTGTTTCTCCGGGCAAAGTGGGGGGTCG CTATCGGGGGCTGGACTGGCGATTTCGCCACCTGAGCAAGCCGGTGGTTTTGCCCACCAAGCTTGACCTGCTCTATCGGG GCGCGGCCTATCGTTCCGAAGCTGCTGCAGCGCCGGCTCAAACCGTTCAGACAGCCGAGGCACCTGCTCCTGGCCGTTCT CACGTTCTGGATGAGCTGGCTCGCCGCCTGATGATGGGCCACCAACGGGCGATTCGGGTTCGTCAGCAAGCCATGTTGGT GCGTGGCACGGAGCGGGTTGGCCTGCAGGCCAATGTGCGCAACTTCTGGAACCGCATCCAAGGAAAGGTGCATCCCACCT TCCGTCTCACCTATGACCGCAGCCGGGTCAGCATGAGCTAG
Upstream 100 bases:
>100_bases GCGCCTCAACCCTTGGGACTGTCCACGGGACATCTCAGGTCACTCCTCAGGAAGTGAAGTGGATACAGACCATATACGTT TGGAGGCGAAGATGAAGATC
Downstream 100 bases:
>100_bases TTTGCTTTGCCCACCCCAGTTCATCTTCTGGTATGGCGGGAGAGGGATCCCTTTGGATCTGGATGGGGGGTCAGGGGAGG GGAAAAGGCGCGGCTACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSEAAAAPAQTVQTAEAPAPGRS HVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVRNFWNRIQGKVHPTFRLTYDRSRVSMS
Sequences:
>Translated_146_residues MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSEAAAAPAQTVQTAEAPAPGRS HVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVRNFWNRIQGKVHPTFRLTYDRSRVSMS >Mature_146_residues MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSEAAAAPAQTVQTAEAPAPGRS HVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVRNFWNRIQGKVHPTFRLTYDRSRVSMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16441; Mature: 16441
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: PS00496 PII_GLNB_UMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSE CCCCCCCCCEECCCCEEEECCCCCCCEECCCCHHHHHCCCCEECCCHHHHHHCCCCCCCH AAAAPAQTVQTAEAPAPGRSHVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVR HHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEHHH NFWNRIQGKVHPTFRLTYDRSRVSMS HHHHHHCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSE CCCCCCCCCEECCCCEEEECCCCCCCEECCCCHHHHHCCCCEECCCHHHHHHCCCCCCCH AAAAPAQTVQTAEAPAPGRSHVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVR HHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEHHH NFWNRIQGKVHPTFRLTYDRSRVSMS HHHHHHCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA