| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605626
Identifier: 86605626
GI number: 86605626
Start: 933940
End: 935304
Strand: Reverse
Name: 86605626
Synonym: CYA_0924
Alternate gene names: NA
Gene position: 935304-933940 (Counterclockwise)
Preceding gene: 86605629
Following gene: 86605624
Centisome position: 31.89
GC content: 63.52
Gene sequence:
>1365_bases ATGTTCCAAGATTGCAGCTCCCTCATCCAGTTCAACCCGCCTGCTTTTTCCTATGGAGTTGCCATTTGCGATGTGGATCG GGACGGGGCTTTTGAGCTGTTTGTGTGCGGCTTCCGCGGCCCGAATCGGGTTTTGAAGTGGAACGGCCAGGCGCTGGTGG ATTTGGTGGACGATACTCTGGCCGATGCAGGGCGGATGGCCATTGGGGTGGCTGCCGGCGACTTCGACGGCGACGGGCAA GAAGAACTCTACGTCTTGAATACTGATACCTTCGGCGGGCGCAAGCGCTTTGGGGATCGCCTCTTCGACTGGCAGGGATC CCGTTGGGTGGATCTGTTCTCTCTGCCCCACAACCAAGATGCCCTCAACTTGACGGCAGGTCGCTCGGTGGCCTGCGTGG ATCGCTTTGGCCAGGGGCGGTACGGGTTTTTCGTGGCCAACTATGGCGGCCCCATGCGCCTTTACGAGCTGTCCGCCGGC CAGATGATCGCCGATGTGGCGCCAGAGGCGGGGGTAAACCGGGTAACGGGAGGGCGGGGGCTGGTGGCCGTGCCCCTGGT TTCCCAGCGGATGGACATTTTTGCCGTCAACGAGCAGGGGCCCAACTTTTTGTTTCGCAACCGCGGGGATGGCACCTTTG AGGAAATTGCCGCCGAGGTGGGGTTGGCGGATCCCGGCGAGCACGGACGGGGGGTGGCAGCGGTGGATCTGGATGGGGAC GGGCGGTTGGATCTGGTGTACGGCAACTGGGAAGGGCCGCATCGCCTCTGGATCCAAACTTCCAGCGGCGTCTTCAAAAA TGTGGCCCCTCCCGAGCTGGCCAGGCCCTCCCGCATCCGCACGGTGATCGCTGCCGACTTCGACAACGACGGTTACCCAG AGCTGTTTTTTAACAACATCGGCGAGCCCAACCGGCTGTTTGGCTGGCGCTCCGGCTGCTGGCAGGCTATCGACATGGGA GATGCTGTCGAGCCGCAGGGACTGGGGACGGGAGCGGCGGTGGCGGATGTGGATGGGGACGGTTGCCTAGAGCTGCTCGT TGCCCACGGAGAATCGGGCGCCCAGCCCCTGAGCTTCTACCGTCCGCTGGCCCCTGGCAACAACTGGCTGAGAGTTCTGC CCCTCACCCGCCAGGGATCCCCAGCCCGCGGCGCCTTGGTACGCCTGGTTACCTCTACCCGCACGCAGATCCGACCCATC GACGCCGGCAGCGGCTACCTCTGCCAGATGGAGCCGGTGGCCCATTTTGGCCTGGGATCCGAGTCGGCAGTAGAAGCCAT CCAGATCCAGTGGCCGGACGGCAAACAGGTGCAGGTGGCTCACCCACCGGTCAACCAGCTCCTGCGGATCCCCTATCCTG GTTAG
Upstream 100 bases:
>100_bases GATGCGTGGCATGGTTGAAAGGGAAGCGACAGCGAGGATCTAGCATACCATTAGAGTCTGGAGCCCCACCAGTTCCTGCC TCTCCTACGACGGGATCCCC
Downstream 100 bases:
>100_bases CTCCCCTGAGAGGGGTTTTGTCTCTATCTACTCAGCCGAGCCCGAGATCCCTGCCCATTCCGGCTGTACAGGGCGCTGCC AGTGCTCCCACCAGGCGGTC
Product: FG-GAP repeat- ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: ASPIC/UnbV; FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; FG-GAP Repeat Protein; Fg-Gap Repeat/Aspic/Unbv Domain Protein; Protein Tyrosine Kinase Family
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MFQDCSSLIQFNPPAFSYGVAICDVDRDGAFELFVCGFRGPNRVLKWNGQALVDLVDDTLADAGRMAIGVAAGDFDGDGQ EELYVLNTDTFGGRKRFGDRLFDWQGSRWVDLFSLPHNQDALNLTAGRSVACVDRFGQGRYGFFVANYGGPMRLYELSAG QMIADVAPEAGVNRVTGGRGLVAVPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPGEHGRGVAAVDLDGD GRLDLVYGNWEGPHRLWIQTSSGVFKNVAPPELARPSRIRTVIAADFDNDGYPELFFNNIGEPNRLFGWRSGCWQAIDMG DAVEPQGLGTGAAVADVDGDGCLELLVAHGESGAQPLSFYRPLAPGNNWLRVLPLTRQGSPARGALVRLVTSTRTQIRPI DAGSGYLCQMEPVAHFGLGSESAVEAIQIQWPDGKQVQVAHPPVNQLLRIPYPG
Sequences:
>Translated_454_residues MFQDCSSLIQFNPPAFSYGVAICDVDRDGAFELFVCGFRGPNRVLKWNGQALVDLVDDTLADAGRMAIGVAAGDFDGDGQ EELYVLNTDTFGGRKRFGDRLFDWQGSRWVDLFSLPHNQDALNLTAGRSVACVDRFGQGRYGFFVANYGGPMRLYELSAG QMIADVAPEAGVNRVTGGRGLVAVPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPGEHGRGVAAVDLDGD GRLDLVYGNWEGPHRLWIQTSSGVFKNVAPPELARPSRIRTVIAADFDNDGYPELFFNNIGEPNRLFGWRSGCWQAIDMG DAVEPQGLGTGAAVADVDGDGCLELLVAHGESGAQPLSFYRPLAPGNNWLRVLPLTRQGSPARGALVRLVTSTRTQIRPI DAGSGYLCQMEPVAHFGLGSESAVEAIQIQWPDGKQVQVAHPPVNQLLRIPYPG >Mature_454_residues MFQDCSSLIQFNPPAFSYGVAICDVDRDGAFELFVCGFRGPNRVLKWNGQALVDLVDDTLADAGRMAIGVAAGDFDGDGQ EELYVLNTDTFGGRKRFGDRLFDWQGSRWVDLFSLPHNQDALNLTAGRSVACVDRFGQGRYGFFVANYGGPMRLYELSAG QMIADVAPEAGVNRVTGGRGLVAVPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPGEHGRGVAAVDLDGD GRLDLVYGNWEGPHRLWIQTSSGVFKNVAPPELARPSRIRTVIAADFDNDGYPELFFNNIGEPNRLFGWRSGCWQAIDMG DAVEPQGLGTGAAVADVDGDGCLELLVAHGESGAQPLSFYRPLAPGNNWLRVLPLTRQGSPARGALVRLVTSTRTQIRPI DAGSGYLCQMEPVAHFGLGSESAVEAIQIQWPDGKQVQVAHPPVNQLLRIPYPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=483, Percent_Identity=49.2753623188406, Blast_Score=404, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49118; Mature: 49118
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQDCSSLIQFNPPAFSYGVAICDVDRDGAFELFVCGFRGPNRVLKWNGQALVDLVDDTL CCCCHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCEEEEHHHHHH ADAGRMAIGVAAGDFDGDGQEELYVLNTDTFGGRKRFGDRLFDWQGSRWVDLFSLPHNQD HCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHCCHHCCCCCCCEEEEEECCCCCC ALNLTAGRSVACVDRFGQGRYGFFVANYGGPMRLYELSAGQMIADVAPEAGVNRVTGGRG CEEEECCCEEEEHHHCCCCCEEEEEEECCCCEEEEEECCCCEEECCCCCCCCCEECCCCC LVAVPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPGEHGRGVAAVDLDGD EEEECCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC GRLDLVYGNWEGPHRLWIQTSSGVFKNVAPPELARPSRIRTVIAADFDNDGYPELFFNNI CEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCC GEPNRLFGWRSGCWQAIDMGDAVEPQGLGTGAAVADVDGDGCLELLVAHGESGAQPLSFY CCCHHEECCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCHHHH RPLAPGNNWLRVLPLTRQGSPARGALVRLVTSTRTQIRPIDAGSGYLCQMEPVAHFGLGS CCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCHHHCCCCC ESAVEAIQIQWPDGKQVQVAHPPVNQLLRIPYPG CCCEEEEEEECCCCCEEEEECCCHHHEEECCCCC >Mature Secondary Structure MFQDCSSLIQFNPPAFSYGVAICDVDRDGAFELFVCGFRGPNRVLKWNGQALVDLVDDTL CCCCHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCEEEEHHHHHH ADAGRMAIGVAAGDFDGDGQEELYVLNTDTFGGRKRFGDRLFDWQGSRWVDLFSLPHNQD HCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHCCHHCCCCCCCEEEEEECCCCCC ALNLTAGRSVACVDRFGQGRYGFFVANYGGPMRLYELSAGQMIADVAPEAGVNRVTGGRG CEEEECCCEEEEHHHCCCCCEEEEEEECCCCEEEEEECCCCEEECCCCCCCCCEECCCCC LVAVPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPGEHGRGVAAVDLDGD EEEECCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC GRLDLVYGNWEGPHRLWIQTSSGVFKNVAPPELARPSRIRTVIAADFDNDGYPELFFNNI CEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCC GEPNRLFGWRSGCWQAIDMGDAVEPQGLGTGAAVADVDGDGCLELLVAHGESGAQPLSFY CCCHHEECCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCHHHH RPLAPGNNWLRVLPLTRQGSPARGALVRLVTSTRTQIRPIDAGSGYLCQMEPVAHFGLGS CCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCHHHCCCCC ESAVEAIQIQWPDGKQVQVAHPPVNQLLRIPYPG CCCEEEEEEECCCCCEEEEECCCHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA