| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605622
Identifier: 86605622
GI number: 86605622
Start: 929252
End: 930337
Strand: Reverse
Name: 86605622
Synonym: CYA_0920
Alternate gene names: NA
Gene position: 930337-929252 (Counterclockwise)
Preceding gene: 86605623
Following gene: 86605616
Centisome position: 31.72
GC content: 63.44
Gene sequence:
>1086_bases TTGCCGGAACCCACTGCCCCGGAGGAGGATCCCAGCCTGTTGATGGGCCGGCTGCAGCGCAAAGAGGGGGGGTGGCTGGA TTGGGCAAAGGCCTGCCAAAGCTTGCAACGACAGAAAATGACTCCCCAGGCCATCTTCGAGGCGACCGGGTTTGAGCCCG CCCACCAAAACCAGATCGTTGTCGCCGCCCAGGTTTACGAAGGAATGGCGAAAGCAGGAGCCAGCTCAGCCGTTTTGGAG CACTTTGCCCACAAAGGCAGCGATATTCTCTACGAGTTGCGCATCCTCTCGCCTCAGGATCGCGTCCGGGTGGCGGAGCT GGTTGTCAGCCGCAACCTGGGTGCCGATGAGGCCCACGAGATCGCCCGGGCTGTGAAAAACTATGCCCAACTGCGGCAGC TCCCGGAAGGGTTCACGGATCACCCCGGCGATGCGGTGGCTTACCAAGCCTGGAAAACTGCCCAGGAAACCCGCGATCTC CAGGAGCGAACCCGGGCCATTGGCCGCGCCTTTCAGTATGCCCACAGCGAAACAGCCCGCCAACAGGTTGAGCGGCTCTT GTCGACGTTGGCTCCCGGCTCCCAACCCCAGCGCAAGCCGTTGCCCAGGCTTTCGGTGTTTCGCCCGGAAGAGGATCTGC CCCGTCTGCTGCCGGTGGCCGGATCCCTGCCTCTTTCTACCGCCACCTGGGAGCAGATCCCTGCCGTTGAGCCTCAAGGC CTTTTTGGTTGGGTCACCAGCGTGGCTGGGCAGACGTGGATGGCCTTGCCCGCTTGGCCGGCCATTCAAAGGGCCGCCGA CCCAGTCGCCCTGCAGGTGGACAATGGTTTGCTGGGATCCCTGTTGGGCTGGCCGGTGGCCCCTGAAGAAGAACAGGATC CGATTTTGCTGGTGGCGGATCGCGCCGTTCGCACCTGGGAAGGGAGGGCAGGGGTTTTCCTGGTGGATCGAGGGGGAGCT GTGGCGGTGGAGTGGATAGAGGATTCGCCCCCCTCTCCCCTGCTGGGCCAAGTGCTGATGGCGGTGCGTCCCCCCCGCAT CTTCGACGAGGAGTTGGCGCAGGATCCCTGGCAAATAGAGGAGTAA
Upstream 100 bases:
>100_bases TATAGCCATGGGGTAGTTTACTGTATTGGATGGGTTGGTTCTGTATGCGTTCATTTTGGGCTATTGTCGTTGCGGAGGAA GCGTGGCCATGAGTCAGCAT
Downstream 100 bases:
>100_bases CTCCGGCCAGCCAGACGCACCGCCGCAAGCCCCCGGCCAGGAGCAGGTGGCAAAGCGGCTTCTGGCTTTGCTTCCCAACT GCTCTCTTATGCCGGCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MPEPTAPEEDPSLLMGRLQRKEGGWLDWAKACQSLQRQKMTPQAIFEATGFEPAHQNQIVVAAQVYEGMAKAGASSAVLE HFAHKGSDILYELRILSPQDRVRVAELVVSRNLGADEAHEIARAVKNYAQLRQLPEGFTDHPGDAVAYQAWKTAQETRDL QERTRAIGRAFQYAHSETARQQVERLLSTLAPGSQPQRKPLPRLSVFRPEEDLPRLLPVAGSLPLSTATWEQIPAVEPQG LFGWVTSVAGQTWMALPAWPAIQRAADPVALQVDNGLLGSLLGWPVAPEEEQDPILLVADRAVRTWEGRAGVFLVDRGGA VAVEWIEDSPPSPLLGQVLMAVRPPRIFDEELAQDPWQIEE
Sequences:
>Translated_361_residues MPEPTAPEEDPSLLMGRLQRKEGGWLDWAKACQSLQRQKMTPQAIFEATGFEPAHQNQIVVAAQVYEGMAKAGASSAVLE HFAHKGSDILYELRILSPQDRVRVAELVVSRNLGADEAHEIARAVKNYAQLRQLPEGFTDHPGDAVAYQAWKTAQETRDL QERTRAIGRAFQYAHSETARQQVERLLSTLAPGSQPQRKPLPRLSVFRPEEDLPRLLPVAGSLPLSTATWEQIPAVEPQG LFGWVTSVAGQTWMALPAWPAIQRAADPVALQVDNGLLGSLLGWPVAPEEEQDPILLVADRAVRTWEGRAGVFLVDRGGA VAVEWIEDSPPSPLLGQVLMAVRPPRIFDEELAQDPWQIEE >Mature_360_residues PEPTAPEEDPSLLMGRLQRKEGGWLDWAKACQSLQRQKMTPQAIFEATGFEPAHQNQIVVAAQVYEGMAKAGASSAVLEH FAHKGSDILYELRILSPQDRVRVAELVVSRNLGADEAHEIARAVKNYAQLRQLPEGFTDHPGDAVAYQAWKTAQETRDLQ ERTRAIGRAFQYAHSETARQQVERLLSTLAPGSQPQRKPLPRLSVFRPEEDLPRLLPVAGSLPLSTATWEQIPAVEPQGL FGWVTSVAGQTWMALPAWPAIQRAADPVALQVDNGLLGSLLGWPVAPEEEQDPILLVADRAVRTWEGRAGVFLVDRGGAV AVEWIEDSPPSPLLGQVLMAVRPPRIFDEELAQDPWQIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39890; Mature: 39758
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPTAPEEDPSLLMGRLQRKEGGWLDWAKACQSLQRQKMTPQAIFEATGFEPAHQNQIV CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEE VAAQVYEGMAKAGASSAVLEHFAHKGSDILYELRILSPQDRVRVAELVVSRNLGADEAHE EHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHH IARAVKNYAQLRQLPEGFTDHPGDAVAYQAWKTAQETRDLQERTRAIGRAFQYAHSETAR HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQVERLLSTLAPGSQPQRKPLPRLSVFRPEEDLPRLLPVAGSLPLSTATWEQIPAVEPQG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCH LFGWVTSVAGQTWMALPAWPAIQRAADPVALQVDNGLLGSLLGWPVAPEEEQDPILLVAD HHHHHHHHCCCCEEECCCCHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEC RAVRTWEGRAGVFLVDRGGAVAVEWIEDSPPSPLLGQVLMAVRPPRIFDEELAQDPWQIE CHHHHCCCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCC E C >Mature Secondary Structure PEPTAPEEDPSLLMGRLQRKEGGWLDWAKACQSLQRQKMTPQAIFEATGFEPAHQNQIV CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEE VAAQVYEGMAKAGASSAVLEHFAHKGSDILYELRILSPQDRVRVAELVVSRNLGADEAHE EHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHH IARAVKNYAQLRQLPEGFTDHPGDAVAYQAWKTAQETRDLQERTRAIGRAFQYAHSETAR HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQVERLLSTLAPGSQPQRKPLPRLSVFRPEEDLPRLLPVAGSLPLSTATWEQIPAVEPQG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCH LFGWVTSVAGQTWMALPAWPAIQRAADPVALQVDNGLLGSLLGWPVAPEEEQDPILLVAD HHHHHHHHCCCCEEECCCCHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEC RAVRTWEGRAGVFLVDRGGAVAVEWIEDSPPSPLLGQVLMAVRPPRIFDEELAQDPWQIE CHHHHCCCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA