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The map label for this gene is nifU [H]

Identifier: 86605616

GI number: 86605616

Start: 923278

End: 923520

Strand: Reverse

Name: nifU [H]

Synonym: CYA_0914

Alternate gene names: 86605616

Gene position: 923520-923278 (Counterclockwise)

Preceding gene: 86605622

Following gene: 86605615

Centisome position: 31.49

GC content: 58.44

Gene sequence:

>243_bases
ATGGCACAAGCACTGGAACTAACGGCCGAAAATGTGGAAAAAGTCCTCAACGAGCTGCGCCCCTACCTGCAAGCCGATGG
CGGCAACGTAGAGCTGGTGGAAATCGACGGCCCGGTGGTGAAGCTGCGCCTACAGGGGGCCTGTGGCGCCTGCCCCAGCT
CCACCCTGACCTTAAAAATGGGCATCGAGCGCAAGTTGCGGGAGAGCATTCCCGACATCCTGGAAGTAGAACAAGTGTTC
TGA

Upstream 100 bases:

>100_bases
AGAAGGGCGATCCCTCCCTGGCTTGAGGGGTCTGGCGAGAAATCGCTACAATCAACATCTCGACATCCCAGGCAAGGTCT
CAGCAGAGCTGGAAGCAACT

Downstream 100 bases:

>100_bases
GGGCTCTGCCGCTTCTGGTCTGTTATCTTGGTTCCTTAAGGCGGCAGGTGCAGCCGTCGCTGTGGCTCTCTGCCTCTTGC
TCTTTTTTTCCTTCTCTCCT

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MAQALELTAENVEKVLNELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKMGIERKLRESIPDILEVEQVF

Sequences:

>Translated_80_residues
MAQALELTAENVEKVLNELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKMGIERKLRESIPDILEVEQVF
>Mature_79_residues
AQALELTAENVEKVLNELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKMGIERKLRESIPDILEVEQVF

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17541876, Length=61, Percent_Identity=49.1803278688525, Blast_Score=65, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45551492, Length=62, Percent_Identity=48.3870967741936, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24643765, Length=62, Percent_Identity=48.3870967741936, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45556188, Length=62, Percent_Identity=48.3870967741936, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8751; Mature: 8620

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQALELTAENVEKVLNELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKM
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEE
GIERKLRESIPDILEVEQVF
CCHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
AQALELTAENVEKVLNELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKM
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEE
GIERKLRESIPDILEVEQVF
CCHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8424961 [H]