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The map label for this gene is cmpA [H]

Identifier: 86605596

GI number: 86605596

Start: 902016

End: 903320

Strand: Reverse

Name: cmpA [H]

Synonym: CYA_0894

Alternate gene names: 86605596

Gene position: 903320-902016 (Counterclockwise)

Preceding gene: 86605598

Following gene: 86605595

Centisome position: 30.8

GC content: 59.0

Gene sequence:

>1305_bases
ATGACGTCACGTCGTAACTTTTTGCTGTCTGCGGGTGCGGCCACCGTGGGTGGACTCGTGAGTGGCAGCTTAGCACGGGC
CAGCACAGGCTACTGGGTTGCCCAGGCCAGCGGCCCAGAAACCCCCAATCTCAGGTTAGGCTTTATACCGATTGTGGAGT
CTGCCCCCCTGATCATCGCCAAGGAGAAGGGCTTTTTCGACAAGCACGGCATGACCGGTGTAGAGGTGTTAAAGCAGGCC
AGTTGGCCGGCAGCCCGTGACAACGTGGTCATCGGCTCAGCGGGTGGGGGAATCGACGGTGGCCAGTGGCAGATGCCGAT
GCCTCACATGATCCACATTGGCGCCATCACCAACAACCAGCCGGTGCGCATGGCGGTTCTGTGCCAGTTGATCACCCAAG
GCAACGGGATTGCCATTGCCGGAATGCACACTGGCAAAGGCTTGGGGCTGGACATCTCTGGAGCCGCAGACTACATCAAA
AATTTCAGCGCCAGCAACGGGCGCAAATTCAAGGCTGCCTACACCTTCCCCAACGCCAATCAAGATTTTTGGATCCGCTA
CTGGCTGGCCGCCGGGGGTGTGGATCCGGATCAAGACATTGAGCTGCTGACGGTGCCCTCTGCCGAGACGGTGCAGGGGA
TGCGCAACGGCACCATGGATGCTTTTAGCACCGGGGATCCCTGGCCCTACCGGATTGTGGCCGATGGGATCGGCTTTATG
GCGGCCCTCACCCAGCAGATCTGGCCTTTTCACCCCGAAGAATACTTGGCCATTCGCGCCGACTGGGTGGAGCAAAACCC
CAGAGCCACACAAGCAGTTTTGATGGCTGTGATGGAAGCGCAGCAATGGTGCGACGATCCGGCCAACCGTGAAGAGCTGG
CGCGCATCCTTTCGGGGCGCGCTTATCTGAATGTGCCGGTCGAGGTTCTCACGCCTCCCTTCCAGGGCAAGTACGAATTG
GGAGATGGCAAGCCGGCTGTTCAAGATTTCAACGCCGGGCCTCTGTACTGGGAAGATGGGGGGGGCAGCGTCTCTTATCC
CTACAAGAGCCATGACCTGTGGTTCTTGACCGAATCGCTGCGTTGGGGCTTCCACGCTCGCTTCCTCAAGGATTTGGATA
CTGCCCGCCGTCTGGTGGATGAGGTGAACCGCGAAGATCTCTGGCGGGAGGCTGCCCAAGCGCTGGGAGTGAAGAATATT
CCCAACAACACTTCGCGGGGAACGGAGCGTTTCTTCGATGGTGTGGTGTTTGACCCCCAGGATCCCCAGGCCTACTTGAA
CAGCCTGAAAATCAAGAGGGTCTAG

Upstream 100 bases:

>100_bases
TAAGGATTTCTTGAGATTTCACGAAGGAAATCCGTGGGTCAGGCGACTTGAACTGGAAAGCTTCCTTCTTGCCTTCACAT
ATCCTTTCGATGAGGTGAGC

Downstream 100 bases:

>100_bases
CTGAATAGCTTGATTGGGCCAAGTTCCTCACCTTCTTTCGCAGGAAGTCCATGGCTTACCGTTTCCTTGTTCGAATCTCT
CGCGCGACAGGGATCCTGCC

Product: nitrate/nitrite/cyanate ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTSRRNFLLSAGAATVGGLVSGSLARASTGYWVAQASGPETPNLRLGFIPIVESAPLIIAKEKGFFDKHGMTGVEVLKQA
SWPAARDNVVIGSAGGGIDGGQWQMPMPHMIHIGAITNNQPVRMAVLCQLITQGNGIAIAGMHTGKGLGLDISGAADYIK
NFSASNGRKFKAAYTFPNANQDFWIRYWLAAGGVDPDQDIELLTVPSAETVQGMRNGTMDAFSTGDPWPYRIVADGIGFM
AALTQQIWPFHPEEYLAIRADWVEQNPRATQAVLMAVMEAQQWCDDPANREELARILSGRAYLNVPVEVLTPPFQGKYEL
GDGKPAVQDFNAGPLYWEDGGGSVSYPYKSHDLWFLTESLRWGFHARFLKDLDTARRLVDEVNREDLWREAAQALGVKNI
PNNTSRGTERFFDGVVFDPQDPQAYLNSLKIKRV

Sequences:

>Translated_434_residues
MTSRRNFLLSAGAATVGGLVSGSLARASTGYWVAQASGPETPNLRLGFIPIVESAPLIIAKEKGFFDKHGMTGVEVLKQA
SWPAARDNVVIGSAGGGIDGGQWQMPMPHMIHIGAITNNQPVRMAVLCQLITQGNGIAIAGMHTGKGLGLDISGAADYIK
NFSASNGRKFKAAYTFPNANQDFWIRYWLAAGGVDPDQDIELLTVPSAETVQGMRNGTMDAFSTGDPWPYRIVADGIGFM
AALTQQIWPFHPEEYLAIRADWVEQNPRATQAVLMAVMEAQQWCDDPANREELARILSGRAYLNVPVEVLTPPFQGKYEL
GDGKPAVQDFNAGPLYWEDGGGSVSYPYKSHDLWFLTESLRWGFHARFLKDLDTARRLVDEVNREDLWREAAQALGVKNI
PNNTSRGTERFFDGVVFDPQDPQAYLNSLKIKRV
>Mature_433_residues
TSRRNFLLSAGAATVGGLVSGSLARASTGYWVAQASGPETPNLRLGFIPIVESAPLIIAKEKGFFDKHGMTGVEVLKQAS
WPAARDNVVIGSAGGGIDGGQWQMPMPHMIHIGAITNNQPVRMAVLCQLITQGNGIAIAGMHTGKGLGLDISGAADYIKN
FSASNGRKFKAAYTFPNANQDFWIRYWLAAGGVDPDQDIELLTVPSAETVQGMRNGTMDAFSTGDPWPYRIVADGIGFMA
ALTQQIWPFHPEEYLAIRADWVEQNPRATQAVLMAVMEAQQWCDDPANREELARILSGRAYLNVPVEVLTPPFQGKYELG
DGKPAVQDFNAGPLYWEDGGGSVSYPYKSHDLWFLTESLRWGFHARFLKDLDTARRLVDEVNREDLWREAAQALGVKNIP
NNTSRGTERFFDGVVFDPQDPQAYLNSLKIKRV

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Binds bicarbonate with high affinity [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47605; Mature: 47474

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRRNFLLSAGAATVGGLVSGSLARASTGYWVAQASGPETPNLRLGFIPIVESAPLIIA
CCCCCCEEEECCCHHHHHHHCCCHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEE
KEKGFFDKHGMTGVEVLKQASWPAARDNVVIGSAGGGIDGGQWQMPMPHMIHIGAITNNQ
ECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEECCCCCCEEEEEEECCCC
PVRMAVLCQLITQGNGIAIAGMHTGKGLGLDISGAADYIKNFSASNGRKFKAAYTFPNAN
CHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCHHHHHHCCCCCCCCEEEEEEECCCCC
QDFWIRYWLAAGGVDPDQDIELLTVPSAETVQGMRNGTMDAFSTGDPWPYRIVADGIGFM
CCEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHH
AALTQQIWPFHPEEYLAIRADWVEQNPRATQAVLMAVMEAQQWCDDPANREELARILSGR
HHHHHHHCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
AYLNVPVEVLTPPFQGKYELGDGKPAVQDFNAGPLYWEDGGGSVSYPYKSHDLWFLTESL
EEEECCHHEECCCCCCCEECCCCCCCHHCCCCCCEEEECCCCEEECCCCCCCEEEEEHHH
RWGFHARFLKDLDTARRLVDEVNREDLWREAAQALGVKNIPNNTSRGTERFFDGVVFDPQ
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCEEECCC
DPQAYLNSLKIKRV
CHHHHHHCEEECCC
>Mature Secondary Structure 
TSRRNFLLSAGAATVGGLVSGSLARASTGYWVAQASGPETPNLRLGFIPIVESAPLIIA
CCCCCEEEECCCHHHHHHHCCCHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEE
KEKGFFDKHGMTGVEVLKQASWPAARDNVVIGSAGGGIDGGQWQMPMPHMIHIGAITNNQ
ECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEECCCCCCEEEEEEECCCC
PVRMAVLCQLITQGNGIAIAGMHTGKGLGLDISGAADYIKNFSASNGRKFKAAYTFPNAN
CHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCHHHHHHCCCCCCCCEEEEEEECCCCC
QDFWIRYWLAAGGVDPDQDIELLTVPSAETVQGMRNGTMDAFSTGDPWPYRIVADGIGFM
CCEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHH
AALTQQIWPFHPEEYLAIRADWVEQNPRATQAVLMAVMEAQQWCDDPANREELARILSGR
HHHHHHHCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
AYLNVPVEVLTPPFQGKYELGDGKPAVQDFNAGPLYWEDGGGSVSYPYKSHDLWFLTESL
EEEECCHHEECCCCCCCEECCCCCCCHHCCCCCCEEEECCCCEEECCCCCCCEEEEEHHH
RWGFHARFLKDLDTARRLVDEVNREDLWREAAQALGVKNIPNNTSRGTERFFDGVVFDPQ
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCEEECCC
DPQAYLNSLKIKRV
CHHHHHHCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]