| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is crm2-1
Identifier: 86605586
GI number: 86605586
Start: 885047
End: 887242
Strand: Reverse
Name: crm2-1
Synonym: CYA_0882
Alternate gene names: NA
Gene position: 887242-885047 (Counterclockwise)
Preceding gene: 86605589
Following gene: 86605585
Centisome position: 30.25
GC content: 64.25
Gene sequence:
>2196_bases ATGTGCGCAGCCATCCGCACCGACGACGCAGCCGGGATCCCGGAGGCGCTGCAGCCCCTCTGGGCGCAGGTGCGCCAATT TCAGGAGAGCGTGGCGGCCACAACCTTTCCCAAAACCTTGGCAGAGTTGCAATCGCGCTATCCGGAGCTGTGGCGGCAGA CCAGCCGCATCGGCTTGGTTTACGGGGGGGCTACCAAGATCAAGGGCTACGTCTTCGAGTCCGCCAAACTGCCGGAAATT CGCGGCGCCTCGGCCCTGTTGGATCGCATTAACCTGGTGGATCTGCCCGCCTTTTTTGGGGATCCCGAGCAAACCTACTT GGGGTGGAAAGCCTTGGGGAAGGAGTCTCGAGCAGAGCTGGAGGCCTACGTGAACCGGCGGGTTCGGCCCTGGCTGCAGC AGCACTACCCGGCTTTGGCGCAGGCTCTCATTCCGGAGCTCCTCATCTACTCCACCGGCGGCAACCTCTTGGCCTTCTGT CCGGCGGCCTATGTGGACGACCTCTGCGAGGCCATCGAGCGCCGCTACACCGAAGAAACCCTCACCGCCAACGCCTGTGC CGTGGGATCCGCCTTTCGGCTGCTGGAACTGCGCTACGGCCTGTTGCGGGATCCCATCGAGCGCACCCCCTGGCTGGACT GGCTGGCCCAACACCAGGCCCACCCTCTGGTGAGGGCCTACTTTGGAGATTGCAGCGAAGCCAGCTTCCAGGCCCGCAAA AGTTTCAACGAGCTGGTGGGCCACCTGGCTGCCCGCTTCCAGCACCGCCGCAACGGCAATCCGGATCCCGGTCGTCCCAG CCGCGCCCATCCCGCCTGTTTTGAAACCCACCCCTACCTGCGCCGCGACAGCACCGACCGCCGCCCGGCCCTGGCCAAAG CCGACCTGCCAGGTCAGCCCTGGCTATCGGAGGCCACAGCCCGCAAAGCGCTGGTGGGCCGCCAGGCCAAGCGCCTGGAG ACAGGCCAGCAGGGGTGGTTCCGCAAATTCCCCGCCTGGGATCCCGGCTTTGTGGAAAGCTGGGTAACGCGATTTGCCCG CTTCCTCGACTCTCCCGCCGGCGAGCCCTACCAGGAGCGCTATTTGCAGCCCTGCGCGGGATCCGGCCAGGGGATCGGCG AGGCGCAATCGCTGCGGGAAGTGGCCAACGCCAGCCAGGGCTTTGTGGCCTACCTCTACGCCGACGGCAACAACATGGGG GGCTACGTGCAGCAGATCCAAACCCCAGAGGCCTACCGGCAATTTAGCCGCGACGTTTCCGAGGCCACGGAACAAGCCGT TTACCGCGCCCTTGCCCAGCACCTGCAGGCGCACCGGCTGCGGGGCCTGCCGCCGGATCCGGAAAGCGGCAGAGACCGCA ACGGCGAGTGGATCCACCCCTTCGAGATCCTGACCATCGGCGGGGACGATGTGCTGATGGTGGTGCCAGCCCACAAGGCC CTGGACATTGCCGCCACCTTTTGTGAGCAGTTCGAGCAGATCCTGCTGGCCAAATCGGCCACCTACGCCGCCCGCTCCCT CGGCCAGGTGCCGCACCGCTACCCGGCCGACAGCCCAGACCAGCTCTGTCGGCTCTCCACCTCGGCAGGCGTGCTGTTTG CCTCGGAAGACACCCCCATCTACTATGCCGAAAGGCTGACCGAACAACTGTTGAAATCTGCCAAAAGCCGCGCCAAAAAG CTGAAGCCCCGCGATCAAGACTTTTCGGTGGCCACCATCGACTTTCTCTCTTTGAAATCGGTGACTTTGATCGCCTCCAG CATCCAGGATTTTCGCCAGCAGGCCCTGGAGAATCGCCAGAACGGCCACCTCCTCAAGCTCTACGCCGGCCCCTACACCG TCCCGGAGATCCGTGGGCTGCTGAGAACGGTGCAAGCTTTGCAGGCGGCGGATTTTCCCCGCTCCCAGCTCTACCAAATC CGCAGCTTTTTGGAAAAAGGCAAGCGCACCGCCACCCTCAACTACCTCTACTTCCGCACCCGGCTGGGCCAAAAAGGGCA GCCGCTGATCGAGGCCTTTGAACGCACCTGGTGCAAGGCCAAAACCAACGACGGCCACCTTCCCCCCTGGATGTACGTGG CGGCGGAGGGGGAACCCACCTACGAGACCATCTGGCGGGATCTGGTGGATCTGTACGCTTTTGTCCAAAAACAGCCCCAG GCCGAGGGTCGGCCCGTTCCTGTGGAGGTGAAGTGA
Upstream 100 bases:
>100_bases CGCTACCTCCTCTGCCTCCCCCGTGCCCATCGCGTTGGCCTGGTGCCTGGCCTGGGGAGAAGGGCGGGATCCCCAATTTC CCTTGCCGATTCTGCAGCAG
Downstream 100 bases:
>100_bases TGGTTCGGCTGGCAGAGCTGCCCCAAACGAGCACCTCTATCCCTTTGAAGGCCACCCTCGCCTCGGCTCTGGCGGTGGGA TCCGGCGGCTCCAGCGGCTC
Product: CRISPR-associated RAMP Crm2 family protein
Products: NA
Alternate protein names: Hydrolase; CRISPR-Associated Protein Crm2 Family; Crm2 Family CRISPR-Associated Protein
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MCAAIRTDDAAGIPEALQPLWAQVRQFQESVAATTFPKTLAELQSRYPELWRQTSRIGLVYGGATKIKGYVFESAKLPEI RGASALLDRINLVDLPAFFGDPEQTYLGWKALGKESRAELEAYVNRRVRPWLQQHYPALAQALIPELLIYSTGGNLLAFC PAAYVDDLCEAIERRYTEETLTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHQAHPLVRAYFGDCSEASFQARK SFNELVGHLAARFQHRRNGNPDPGRPSRAHPACFETHPYLRRDSTDRRPALAKADLPGQPWLSEATARKALVGRQAKRLE TGQQGWFRKFPAWDPGFVESWVTRFARFLDSPAGEPYQERYLQPCAGSGQGIGEAQSLREVANASQGFVAYLYADGNNMG GYVQQIQTPEAYRQFSRDVSEATEQAVYRALAQHLQAHRLRGLPPDPESGRDRNGEWIHPFEILTIGGDDVLMVVPAHKA LDIAATFCEQFEQILLAKSATYAARSLGQVPHRYPADSPDQLCRLSTSAGVLFASEDTPIYYAERLTEQLLKSAKSRAKK LKPRDQDFSVATIDFLSLKSVTLIASSIQDFRQQALENRQNGHLLKLYAGPYTVPEIRGLLRTVQALQAADFPRSQLYQI RSFLEKGKRTATLNYLYFRTRLGQKGQPLIEAFERTWCKAKTNDGHLPPWMYVAAEGEPTYETIWRDLVDLYAFVQKQPQ AEGRPVPVEVK
Sequences:
>Translated_731_residues MCAAIRTDDAAGIPEALQPLWAQVRQFQESVAATTFPKTLAELQSRYPELWRQTSRIGLVYGGATKIKGYVFESAKLPEI RGASALLDRINLVDLPAFFGDPEQTYLGWKALGKESRAELEAYVNRRVRPWLQQHYPALAQALIPELLIYSTGGNLLAFC PAAYVDDLCEAIERRYTEETLTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHQAHPLVRAYFGDCSEASFQARK SFNELVGHLAARFQHRRNGNPDPGRPSRAHPACFETHPYLRRDSTDRRPALAKADLPGQPWLSEATARKALVGRQAKRLE TGQQGWFRKFPAWDPGFVESWVTRFARFLDSPAGEPYQERYLQPCAGSGQGIGEAQSLREVANASQGFVAYLYADGNNMG GYVQQIQTPEAYRQFSRDVSEATEQAVYRALAQHLQAHRLRGLPPDPESGRDRNGEWIHPFEILTIGGDDVLMVVPAHKA LDIAATFCEQFEQILLAKSATYAARSLGQVPHRYPADSPDQLCRLSTSAGVLFASEDTPIYYAERLTEQLLKSAKSRAKK LKPRDQDFSVATIDFLSLKSVTLIASSIQDFRQQALENRQNGHLLKLYAGPYTVPEIRGLLRTVQALQAADFPRSQLYQI RSFLEKGKRTATLNYLYFRTRLGQKGQPLIEAFERTWCKAKTNDGHLPPWMYVAAEGEPTYETIWRDLVDLYAFVQKQPQ AEGRPVPVEVK >Mature_731_residues MCAAIRTDDAAGIPEALQPLWAQVRQFQESVAATTFPKTLAELQSRYPELWRQTSRIGLVYGGATKIKGYVFESAKLPEI RGASALLDRINLVDLPAFFGDPEQTYLGWKALGKESRAELEAYVNRRVRPWLQQHYPALAQALIPELLIYSTGGNLLAFC PAAYVDDLCEAIERRYTEETLTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHQAHPLVRAYFGDCSEASFQARK SFNELVGHLAARFQHRRNGNPDPGRPSRAHPACFETHPYLRRDSTDRRPALAKADLPGQPWLSEATARKALVGRQAKRLE TGQQGWFRKFPAWDPGFVESWVTRFARFLDSPAGEPYQERYLQPCAGSGQGIGEAQSLREVANASQGFVAYLYADGNNMG GYVQQIQTPEAYRQFSRDVSEATEQAVYRALAQHLQAHRLRGLPPDPESGRDRNGEWIHPFEILTIGGDDVLMVVPAHKA LDIAATFCEQFEQILLAKSATYAARSLGQVPHRYPADSPDQLCRLSTSAGVLFASEDTPIYYAERLTEQLLKSAKSRAKK LKPRDQDFSVATIDFLSLKSVTLIASSIQDFRQQALENRQNGHLLKLYAGPYTVPEIRGLLRTVQALQAADFPRSQLYQI RSFLEKGKRTATLNYLYFRTRLGQKGQPLIEAFERTWCKAKTNDGHLPPWMYVAAEGEPTYETIWRDLVDLYAFVQKQPQ AEGRPVPVEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82339; Mature: 82339
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAAIRTDDAAGIPEALQPLWAQVRQFQESVAATTFPKTLAELQSRYPELWRQTSRIGLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE YGGATKIKGYVFESAKLPEIRGASALLDRINLVDLPAFFGDPEQTYLGWKALGKESRAEL ECCCHHHCEEEECCCCCCCCCCHHHHHHHCCHHCCHHHCCCCHHHHHHHHHHCCHHHHHH EAYVNRRVRPWLQQHYPALAQALIPELLIYSTGGNLLAFCPAAYVDDLCEAIERRYTEET HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECHHHHHHHHHHHHHHHHHHHH LTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHQAHPLVRAYFGDCSEASFQARK HHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH SFNELVGHLAARFQHRRNGNPDPGRPSRAHPACFETHPYLRRDSTDRRPALAKADLPGQP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCC WLSEATARKALVGRQAKRLETGQQGWFRKFPAWDPGFVESWVTRFARFLDSPAGEPYQER CHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH YLQPCAGSGQGIGEAQSLREVANASQGFVAYLYADGNNMGGYVQQIQTPEAYRQFSRDVS HHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHH EATEQAVYRALAQHLQAHRLRGLPPDPESGRDRNGEWIHPFEILTIGGDDVLMVVPAHKA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCEEEEEECCCCEEEEECCCHH LDIAATFCEQFEQILLAKSATYAARSLGQVPHRYPADSPDQLCRLSTSAGVLFASEDTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCH YYAERLTEQLLKSAKSRAKKLKPRDQDFSVATIDFLSLKSVTLIASSIQDFRQQALENRQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC NGHLLKLYAGPYTVPEIRGLLRTVQALQAADFPRSQLYQIRSFLEKGKRTATLNYLYFRT CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHH RLGQKGQPLIEAFERTWCKAKTNDGHLPPWMYVAAEGEPTYETIWRDLVDLYAFVQKQPQ HCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC AEGRPVPVEVK CCCCCCCCEEC >Mature Secondary Structure MCAAIRTDDAAGIPEALQPLWAQVRQFQESVAATTFPKTLAELQSRYPELWRQTSRIGLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE YGGATKIKGYVFESAKLPEIRGASALLDRINLVDLPAFFGDPEQTYLGWKALGKESRAEL ECCCHHHCEEEECCCCCCCCCCHHHHHHHCCHHCCHHHCCCCHHHHHHHHHHCCHHHHHH EAYVNRRVRPWLQQHYPALAQALIPELLIYSTGGNLLAFCPAAYVDDLCEAIERRYTEET HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECHHHHHHHHHHHHHHHHHHHH LTANACAVGSAFRLLELRYGLLRDPIERTPWLDWLAQHQAHPLVRAYFGDCSEASFQARK HHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH SFNELVGHLAARFQHRRNGNPDPGRPSRAHPACFETHPYLRRDSTDRRPALAKADLPGQP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCC WLSEATARKALVGRQAKRLETGQQGWFRKFPAWDPGFVESWVTRFARFLDSPAGEPYQER CHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH YLQPCAGSGQGIGEAQSLREVANASQGFVAYLYADGNNMGGYVQQIQTPEAYRQFSRDVS HHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHH EATEQAVYRALAQHLQAHRLRGLPPDPESGRDRNGEWIHPFEILTIGGDDVLMVVPAHKA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCEEEEEECCCCEEEEECCCHH LDIAATFCEQFEQILLAKSATYAARSLGQVPHRYPADSPDQLCRLSTSAGVLFASEDTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCH YYAERLTEQLLKSAKSRAKKLKPRDQDFSVATIDFLSLKSVTLIASSIQDFRQQALENRQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC NGHLLKLYAGPYTVPEIRGLLRTVQALQAADFPRSQLYQIRSFLEKGKRTATLNYLYFRT CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHH RLGQKGQPLIEAFERTWCKAKTNDGHLPPWMYVAAEGEPTYETIWRDLVDLYAFVQKQPQ HCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC AEGRPVPVEVK CCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA