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The map label for this gene is cas2-3

Identifier: 86605589

GI number: 86605589

Start: 892609

End: 892887

Strand: Reverse

Name: cas2-3

Synonym: CYA_0885

Alternate gene names: NA

Gene position: 892887-892609 (Counterclockwise)

Preceding gene: 86605591

Following gene: 86605586

Centisome position: 30.45

GC content: 59.14

Gene sequence:

>279_bases
ATGCTGTGGTTGGTTTGCTACGACGTGGTGGACGATAAGCGCCGACACCAGTTGGCCAAACGCCTGGAGCAGTGCTGCCA
GCGAGTGCAATACTCCGTTTTTGAATGCCCCCTGGACACTGCCGAGCTGGAAGAGAAGCTGGAAAAGTCGTGGCTGCCTC
TGCTCAACCTCCAGGAAGATAGCCTGCGGGCCTACCCTCTGGATGCCAGCGCCAAACAACGCACCAAGGTCTTCGGCGGG
CCTCCCCCCTACGAGCCGCCGGACTACCTCATTTTTTGA

Upstream 100 bases:

>100_bases
GCCGCCTGCCCCTCAGTCAAATTGTGCTGGAGCAAGCCCGCCGGCTGAGCCGTTGCCTGGTGAGCGGTGACCTAGACTAT
GAGCCCATAGAGCTGCGCTG

Downstream 100 bases:

>100_bases
GGTTCTCAGCTCGGCCAAAATTGTAAAGTTTTGTGCGCGATCCGTCGGGGCAAGCTATCGCTAGCCTTTCCTTACCGACG
CCAGCCTTTAAGAGGAATCT

Product: CRISPR-associated Cas2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLWLVCYDVVDDKRRHQLAKRLEQCCQRVQYSVFECPLDTAELEEKLEKSWLPLLNLQEDSLRAYPLDASAKQRTKVFGG
PPPYEPPDYLIF

Sequences:

>Translated_92_residues
MLWLVCYDVVDDKRRHQLAKRLEQCCQRVQYSVFECPLDTAELEEKLEKSWLPLLNLQEDSLRAYPLDASAKQRTKVFGG
PPPYEPPDYLIF
>Mature_92_residues
MLWLVCYDVVDDKRRHQLAKRLEQCCQRVQYSVFECPLDTAELEEKLEKSWLPLLNLQEDSLRAYPLDASAKQRTKVFGG
PPPYEPPDYLIF

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10846; Mature: 10846

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWLVCYDVVDDKRRHQLAKRLEQCCQRVQYSVFECPLDTAELEEKLEKSWLPLLNLQED
CEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
SLRAYPLDASAKQRTKVFGGPPPYEPPDYLIF
CCEECCCCCCCHHHHCCCCCCCCCCCCCCEEC
>Mature Secondary Structure
MLWLVCYDVVDDKRRHQLAKRLEQCCQRVQYSVFECPLDTAELEEKLEKSWLPLLNLQED
CEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
SLRAYPLDASAKQRTKVFGGPPPYEPPDYLIF
CCEECCCCCCCHHHHCCCCCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA