| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605582
Identifier: 86605582
GI number: 86605582
Start: 882527
End: 882664
Strand: Reverse
Name: 86605582
Synonym: CYA_0878
Alternate gene names: NA
Gene position: 882664-882527 (Counterclockwise)
Preceding gene: 86605583
Following gene: 86605581
Centisome position: 30.1
GC content: 50.72
Gene sequence:
>138_bases ATGACCAGTTGTGCCCTTGAGGGTGTCGTCTCGACCTTCCGGCTCAGCCAGTTGAAAATCATCCCCATCCTGTTTGCCGA AGCCGTAGTGGATGGAGGATATCTGTGGAGCGTTAACTTCAACCTTAACCTGATTTGA
Upstream 100 bases:
>100_bases CCCCAAAGTCAACGAGATCAAAATTGACTTGATCCGGCGTTACCTGGGCTATGGGGCGCGCTATCTCAAGTACAAGCGAG AAGGGGGAGGATCTTAAAGC
Downstream 100 bases:
>100_bases GGGAACGATGTTCGACGTTTTCAAAAACCGCTTGGAGATCACCGGCACGCTCACCACCGTGACCGCCCTGCACATCGGGG TGGGCCGCTCCACCGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MTSCALEGVVSTFRLSQLKIIPILFAEAVVDGGYLWSVNFNLNLI
Sequences:
>Translated_45_residues MTSCALEGVVSTFRLSQLKIIPILFAEAVVDGGYLWSVNFNLNLI >Mature_44_residues TSCALEGVVSTFRLSQLKIIPILFAEAVVDGGYLWSVNFNLNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4944; Mature: 4813
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSCALEGVVSTFRLSQLKIIPILFAEAVVDGGYLWSVNFNLNLI CCCCHHHHHHHHHHHCCEEEHHHEEEHHHCCCCEEEEEEEEEEEC >Mature Secondary Structure TSCALEGVVSTFRLSQLKIIPILFAEAVVDGGYLWSVNFNLNLI CCCHHHHHHHHHHHCCEEEHHHEEEHHHCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA