Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605583

Identifier: 86605583

GI number: 86605583

Start: 882668

End: 883114

Strand: Reverse

Name: 86605583

Synonym: CYA_0879

Alternate gene names: NA

Gene position: 883114-882668 (Counterclockwise)

Preceding gene: 86605584

Following gene: 86605582

Centisome position: 30.11

GC content: 52.13

Gene sequence:

>447_bases
ATGACCTTCGCCACCAGCGAGAGCAAACTGGAGCAAAAACAGGAACTTGAGATCCAGCGGCACATTCGGCTGGCCGAAGA
TGAGCTGGTTGCCAGAATCCAAACCGCCTTGGATAACTTTAAAGGTCTGAGCAAATTGGAAGAGGCCCAGTACCGCAACT
TGTTGCATGTGGCAGCTTCCACCGAAAGCTCAGAGGTAATCAAGAACTTCTTGCGCTACCAGATGGGGCGAGATGAAAAG
TGGGGTCGGGGCAAGAACTCCTTGGCAGAAGCCATCATCCAAGACATCGACAACTGGATCCATCAAAAGGCCCTCGCCAT
TGCCCAAAAGGCCGGCGTTGAAGAAAGATCCCCCAAAGTCAACGAGATCAAAATTGACTTGATCCGGCGTTACCTGGGCT
ATGGGGCGCGCTATCTCAAGTACAAGCGAGAAGGGGGAGGATCTTAA

Upstream 100 bases:

>100_bases
CGGAGATGGAATACTGGGGCATCGGCGAGCGAACCGCGGAGGGATTTGGCCAAATTGAGGTCTGTAGTCTGTTCCATCAT
CATTTCTGGGAGAACCCGCT

Downstream 100 bases:

>100_bases
AGCATGACCAGTTGTGCCCTTGAGGGTGTCGTCTCGACCTTCCGGCTCAGCCAGTTGAAAATCATCCCCATCCTGTTTGC
CGAAGCCGTAGTGGATGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAASTESSEVIKNFLRYQMGRDEK
WGRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKVNEIKIDLIRRYLGYGARYLKYKREGGGS

Sequences:

>Translated_148_residues
MTFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAASTESSEVIKNFLRYQMGRDEK
WGRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKVNEIKIDLIRRYLGYGARYLKYKREGGGS
>Mature_147_residues
TFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAASTESSEVIKNFLRYQMGRDEKW
GRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKVNEIKIDLIRRYLGYGARYLKYKREGGGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17022; Mature: 16890

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TESSEVIKNFLRYQMGRDEKWGRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKV
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
NEIKIDLIRRYLGYGARYLKYKREGGGS
HHHHHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure 
TFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TESSEVIKNFLRYQMGRDEKWGRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKV
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
NEIKIDLIRRYLGYGARYLKYKREGGGS
HHHHHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA