| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605583
Identifier: 86605583
GI number: 86605583
Start: 882668
End: 883114
Strand: Reverse
Name: 86605583
Synonym: CYA_0879
Alternate gene names: NA
Gene position: 883114-882668 (Counterclockwise)
Preceding gene: 86605584
Following gene: 86605582
Centisome position: 30.11
GC content: 52.13
Gene sequence:
>447_bases ATGACCTTCGCCACCAGCGAGAGCAAACTGGAGCAAAAACAGGAACTTGAGATCCAGCGGCACATTCGGCTGGCCGAAGA TGAGCTGGTTGCCAGAATCCAAACCGCCTTGGATAACTTTAAAGGTCTGAGCAAATTGGAAGAGGCCCAGTACCGCAACT TGTTGCATGTGGCAGCTTCCACCGAAAGCTCAGAGGTAATCAAGAACTTCTTGCGCTACCAGATGGGGCGAGATGAAAAG TGGGGTCGGGGCAAGAACTCCTTGGCAGAAGCCATCATCCAAGACATCGACAACTGGATCCATCAAAAGGCCCTCGCCAT TGCCCAAAAGGCCGGCGTTGAAGAAAGATCCCCCAAAGTCAACGAGATCAAAATTGACTTGATCCGGCGTTACCTGGGCT ATGGGGCGCGCTATCTCAAGTACAAGCGAGAAGGGGGAGGATCTTAA
Upstream 100 bases:
>100_bases CGGAGATGGAATACTGGGGCATCGGCGAGCGAACCGCGGAGGGATTTGGCCAAATTGAGGTCTGTAGTCTGTTCCATCAT CATTTCTGGGAGAACCCGCT
Downstream 100 bases:
>100_bases AGCATGACCAGTTGTGCCCTTGAGGGTGTCGTCTCGACCTTCCGGCTCAGCCAGTTGAAAATCATCCCCATCCTGTTTGC CGAAGCCGTAGTGGATGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAASTESSEVIKNFLRYQMGRDEK WGRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKVNEIKIDLIRRYLGYGARYLKYKREGGGS
Sequences:
>Translated_148_residues MTFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAASTESSEVIKNFLRYQMGRDEK WGRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKVNEIKIDLIRRYLGYGARYLKYKREGGGS >Mature_147_residues TFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAASTESSEVIKNFLRYQMGRDEKW GRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKVNEIKIDLIRRYLGYGARYLKYKREGGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17022; Mature: 16890
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAAS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TESSEVIKNFLRYQMGRDEKWGRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKV CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH NEIKIDLIRRYLGYGARYLKYKREGGGS HHHHHHHHHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure TFATSESKLEQKQELEIQRHIRLAEDELVARIQTALDNFKGLSKLEEAQYRNLLHVAAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TESSEVIKNFLRYQMGRDEKWGRGKNSLAEAIIQDIDNWIHQKALAIAQKAGVEERSPKV CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH NEIKIDLIRRYLGYGARYLKYKREGGGS HHHHHHHHHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA