| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605528
Identifier: 86605528
GI number: 86605528
Start: 837615
End: 838040
Strand: Reverse
Name: 86605528
Synonym: CYA_0824
Alternate gene names: NA
Gene position: 838040-837615 (Counterclockwise)
Preceding gene: 86605529
Following gene: 86605516
Centisome position: 28.58
GC content: 62.91
Gene sequence:
>426_bases ATGGCGGTCGGGATCGACCTTGAGCAGAAAAACAGGTGCCAGCTAAGGGGGGTAGCCTGGGCGGTGGGGGTGGCGCTGCT GCTGGCGATCCCCAGCCTGGCTTGGGGGCAAAACCCGCGTGCCCTCAGCATCAGCGCCGATGTCCAGGAGGCCAATGCCA ACACGGGGGTGTTTGTAGCCACCGGCAATGTCACCCTCAGCTTTCCCGCCGAGCGCCTCACGGCCCGCGCCCAGAGAGCG GTGTACTACAGCCGGGAGCAGCGGATCGAGCTGGAGGGCCAGGTCACCATCCGCCAAGGGGAAAATCAGTTGCAAGCAGA AAAAGTCATCTATCACATCGAAAAAGGCACCATCCAGGCCGTGCCAGCAGCAGGAGGCCAGGTGGAGTCCGTTTATGTGC TACCAGAACCCACTGCGAGCCCCTAG
Upstream 100 bases:
>100_bases CAAGGGAGGAAATGGTAAGGACTAACGCGCTGCCCCGCCAGCGGGGCCAGGGATCCCGGGCTAGACTGGCAGGTGGGGTG GTTTGATTGGGGTGATGCGC
Downstream 100 bases:
>100_bases CTAAGGCCTAGATCCAGATCCTGCTGAGAGAAGTGCTCCTTCGCTGTCTGCTTCTGGAAGAAACGCCCACGAAAGGATTC GAACCTCCGACCCCTGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: OstA-Like Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MAVGIDLEQKNRCQLRGVAWAVGVALLLAIPSLAWGQNPRALSISADVQEANANTGVFVATGNVTLSFPAERLTARAQRA VYYSREQRIELEGQVTIRQGENQLQAEKVIYHIEKGTIQAVPAAGGQVESVYVLPEPTASP
Sequences:
>Translated_141_residues MAVGIDLEQKNRCQLRGVAWAVGVALLLAIPSLAWGQNPRALSISADVQEANANTGVFVATGNVTLSFPAERLTARAQRA VYYSREQRIELEGQVTIRQGENQLQAEKVIYHIEKGTIQAVPAAGGQVESVYVLPEPTASP >Mature_140_residues AVGIDLEQKNRCQLRGVAWAVGVALLLAIPSLAWGQNPRALSISADVQEANANTGVFVATGNVTLSFPAERLTARAQRAV YYSREQRIELEGQVTIRQGENQLQAEKVIYHIEKGTIQAVPAAGGQVESVYVLPEPTASP
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15168; Mature: 15037
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGIDLEQKNRCQLRGVAWAVGVALLLAIPSLAWGQNPRALSISADVQEANANTGVFVA CEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEE TGNVTLSFPAERLTARAQRAVYYSREQRIELEGQVTIRQGENQLQAEKVIYHIEKGTIQA ECCEEEECCHHHHHHHHHHHHEECCCCEEEEEEEEEEECCCCHHHHEEEEEEECCCCEEE VPAAGGQVESVYVLPEPTASP ECCCCCCEEEEEEECCCCCCC >Mature Secondary Structure AVGIDLEQKNRCQLRGVAWAVGVALLLAIPSLAWGQNPRALSISADVQEANANTGVFVA EEECCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEE TGNVTLSFPAERLTARAQRAVYYSREQRIELEGQVTIRQGENQLQAEKVIYHIEKGTIQA ECCEEEECCHHHHHHHHHHHHEECCCCEEEEEEEEEEECCCCHHHHEEEEEEECCCCEEE VPAAGGQVESVYVLPEPTASP ECCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA