| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86605516
Identifier: 86605516
GI number: 86605516
Start: 821705
End: 822037
Strand: Reverse
Name: 86605516
Synonym: CYA_0810
Alternate gene names: NA
Gene position: 822037-821705 (Counterclockwise)
Preceding gene: 86605528
Following gene: 86605515
Centisome position: 28.03
GC content: 59.76
Gene sequence:
>333_bases TTGCGGCCTCGTTTTGTCTTCAAAACTTTTTGGGGCGTCTGCCTAGCTGCTGACTTGTTTCTCAGCGGCTGCGGGAGCAG CAACTCGGCGACCCCTGCGCCGGGAGCTGTAGTCTCTACGGCTACCTTGACCCTATCTCCTGCTGCCGAAGTACCGCCGG TAGCGGTGCCCAGCTCCGCCAGCGGCAGTGCTGTGGTCACTTTAAACCAAACCGCCCGTACCCTATCTGTTGAGCAGGTC TCCAGCTTCTTGGCCGGGGCCTACTACCTCAACATCCATACGCAAGCCAATCCTGCCGGCGAGTTGCGAGCCCAGGTGGT TTTCCCTCGCTAA
Upstream 100 bases:
>100_bases GAGGGTGAATCCGAAGCTCGGCCTGCTCCGTACTTGAGGTGGCTTGTTCTCCGACCGAGGAGCTTTTTCCATATTGTTGA CGCTTTTGCTGGATTCGGCC
Downstream 100 bases:
>100_bases ACCTGAGAGGCGACTTCTCAGCCGCCTAGGCGGCGCGGAGCCCTGGGAGGGCACCTTTTATACCTGCTGGGCCGGGTGGA CTGTCTCTTGCAGGGCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MRPRFVFKTFWGVCLAADLFLSGCGSSNSATPAPGAVVSTATLTLSPAAEVPPVAVPSSASGSAVVTLNQTARTLSVEQV SSFLAGAYYLNIHTQANPAGELRAQVVFPR
Sequences:
>Translated_110_residues MRPRFVFKTFWGVCLAADLFLSGCGSSNSATPAPGAVVSTATLTLSPAAEVPPVAVPSSASGSAVVTLNQTARTLSVEQV SSFLAGAYYLNIHTQANPAGELRAQVVFPR >Mature_110_residues MRPRFVFKTFWGVCLAADLFLSGCGSSNSATPAPGAVVSTATLTLSPAAEVPPVAVPSSASGSAVVTLNQTARTLSVEQV SSFLAGAYYLNIHTQANPAGELRAQVVFPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11326; Mature: 11326
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRFVFKTFWGVCLAADLFLSGCGSSNSATPAPGAVVSTATLTLSPAAEVPPVAVPSSA CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCC SGSAVVTLNQTARTLSVEQVSSFLAGAYYLNIHTQANPAGELRAQVVFPR CCCEEEEECCCCCEECHHHHHHHHCEEEEEEEECCCCCCCCEEEEEECCC >Mature Secondary Structure MRPRFVFKTFWGVCLAADLFLSGCGSSNSATPAPGAVVSTATLTLSPAAEVPPVAVPSSA CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCC SGSAVVTLNQTARTLSVEQVSSFLAGAYYLNIHTQANPAGELRAQVVFPR CCCEEEEECCCCCEECHHHHHHHHCEEEEEEEECCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA