Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605464

Identifier: 86605464

GI number: 86605464

Start: 762688

End: 763470

Strand: Reverse

Name: 86605464

Synonym: CYA_0757

Alternate gene names: NA

Gene position: 763470-762688 (Counterclockwise)

Preceding gene: 86605465

Following gene: 86605463

Centisome position: 26.03

GC content: 58.88

Gene sequence:

>783_bases
GTGCTGAAGATCCTGCGGCAGTATCAGGCCCTGTTTACTGAGGGCCTCAATGGCCTGCGGCAAGCAAGGACTCTGGTGGC
CATTCACACGCGGGAGCTGGGGATCCGCGCCCTGCAAAGCCGAGAGCTCCGGCTGGTCGGCTGGGTGATCAAGTTCTTCA
ACACCTACCTGCGGGCGGTGATCAACGCACGGGATATCCGCAGCGGCTACAACCTGCTCAAGCAGTACCGTTTGCTGGCC
GAGGCCGCTTTGCGCCATCAGCAGTCGGCGTTGGTCTTGGAGATGGTCGGCCATTTTCGCTACTACAGCCTAGTGGCCTA
CAAGGCCGGCTTACTTTTCCTTTCTGAAACCTTTGGCTTTGACCTAGGGGTGCTGGCCCAACTCAGCTGCGCGCTGCAGT
CAGAGACAACGGAGGCCATCCTACAAGTCCTGCTCCACCTGGACCAAGACCCGGAAAGCGAGCAGCAGGAAATGACCCTG
CGCGGGATCCGGAAAACCCAGGCGCGGCTAGCAGCCTATTTCCTTAGCCGTGGGCGGGAGGATTTGGCCAGGCTGATCTA
TGAGGATATGCAACAGGAGCCTTTGGCCCGACTGCAGATCATCCGCCAGGAACTTCACTCCACTGCTTCTGAGTTTTGGG
AGTTTACGGATCGGGCGGAGAACTTCTACTACCTGGAGCCTGCCCTTCGACCTTATGCCGAGCAGTTTTTCAGCTGGTTT
CAGGGACTAACCTCTCTGCCAGCCAGCCTGGAGGGCGTTCCTGGATCCCTGGAGCTTCCGTAA

Upstream 100 bases:

>100_bases
TCCTCCTGGAAGCCTTGGATAGCCTAAAGGCCTTGTGGATGTTCTATGCCCAGCACAAGGCGCACCTACCCCGCTCCTGG
TTTCTCTGGACGCCAGCGCT

Downstream 100 bases:

>100_bases
AAAGAAAAGGCCAGATCTCCTTCTGCAGAGTCTAGTCTGGTTAGAGCCGCCACTTGGTGCCGTTCCAGAGGGCTTGTTCA
TGCGTCCCTTCGGCAACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAVINARDIRSGYNLLKQYRLLA
EAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGFDLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTL
RGIRKTQARLAAYFLSRGREDLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF
QGLTSLPASLEGVPGSLELP

Sequences:

>Translated_260_residues
MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAVINARDIRSGYNLLKQYRLLA
EAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGFDLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTL
RGIRKTQARLAAYFLSRGREDLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF
QGLTSLPASLEGVPGSLELP
>Mature_260_residues
MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAVINARDIRSGYNLLKQYRLLA
EAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGFDLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTL
RGIRKTQARLAAYFLSRGREDLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF
QGLTSLPASLEGVPGSLELP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30025; Mature: 30025

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
INARDIRSGYNLLKQYRLLAEAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTLRGIRKTQARLAAYFLSRGRE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHH
QGLTSLPASLEGVPGSLELP
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
INARDIRSGYNLLKQYRLLAEAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTLRGIRKTQARLAAYFLSRGRE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHH
QGLTSLPASLEGVPGSLELP
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA