Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605465

Identifier: 86605465

GI number: 86605465

Start: 763464

End: 764027

Strand: Reverse

Name: 86605465

Synonym: CYA_0758

Alternate gene names: NA

Gene position: 764027-763464 (Counterclockwise)

Preceding gene: 86605466

Following gene: 86605464

Centisome position: 26.05

GC content: 56.21

Gene sequence:

>564_bases
ATGCTGGGCTTTACCCTCTCGGTGGTGGCCATTGTGGTGCAGTTGAGTGCTGATCGCTTCACCCCCAAAGTTACCGAGTT
GTTTCTGCGGGAGAAGACCAATTTCTACCTCTTCTCGTTTTTGATTTTGGCCAATGTAGTCAGCTTGTGGAGCTCGGTGG
CCCTGGGTTTCTACGAGGATCCCCAGCTCCTGATTGGGCTAAACCTACTGCTGGGTACGGCCTCGTTTTTGGTGCTCATC
CCCTACTTCAGCTTTGTGTTTCACTTCCTACAGCCGACTTCGATTATTCGCCGCATTGAGCAGCAGGTGCAGCAGGCGAT
TCTGGGGGCCTCCAGATGGGAACAGCGACAGCCCTCTGCCCTACAACCTTGCGCTGCCGCCCATCAGCGCTGCCTCTCGG
CCTTGGATGAAATCAAAAGTATTGCCATCAGCGCCCTGCGCCAACGGGAGGAGGTCATCCTCCTGGAAGCCTTGGATAGC
CTAAAGGCCTTGTGGATGTTCTATGCCCAGCACAAGGCGCACCTACCCCGCTCCTGGTTTCTCTGGACGCCAGCGCTGTG
CTGA

Upstream 100 bases:

>100_bases
CTGGATCCAAGCCGGCTTGGCGTTGGCTCTTGCCCAACCCGTTCGGCAGCCAGGAGCGCTGCAGGAGTTTGTGGTCACCT
TGGCCGAGGTGCTGTCGGGG

Downstream 100 bases:

>100_bases
AGATCCTGCGGCAGTATCAGGCCCTGTTTACTGAGGGCCTCAATGGCCTGCGGCAAGCAAGGACTCTGGTGGCCATTCAC
ACGCGGGAGCTGGGGATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYEDPQLLIGLNLLLGTASFLVLI
PYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSALQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDS
LKALWMFYAQHKAHLPRSWFLWTPALC

Sequences:

>Translated_187_residues
MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYEDPQLLIGLNLLLGTASFLVLI
PYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSALQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDS
LKALWMFYAQHKAHLPRSWFLWTPALC
>Mature_187_residues
MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYEDPQLLIGLNLLLGTASFLVLI
PYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSALQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDS
LKALWMFYAQHKAHLPRSWFLWTPALC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21298; Mature: 21298

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYED
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PQLLIGLNLLLGTASFLVLIPYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDSLKALWMFYAQHKAHLPRSWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LWTPALC
CCCCCCC
>Mature Secondary Structure
MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYED
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PQLLIGLNLLLGTASFLVLIPYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDSLKALWMFYAQHKAHLPRSWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LWTPALC
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA