| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605465
Identifier: 86605465
GI number: 86605465
Start: 763464
End: 764027
Strand: Reverse
Name: 86605465
Synonym: CYA_0758
Alternate gene names: NA
Gene position: 764027-763464 (Counterclockwise)
Preceding gene: 86605466
Following gene: 86605464
Centisome position: 26.05
GC content: 56.21
Gene sequence:
>564_bases ATGCTGGGCTTTACCCTCTCGGTGGTGGCCATTGTGGTGCAGTTGAGTGCTGATCGCTTCACCCCCAAAGTTACCGAGTT GTTTCTGCGGGAGAAGACCAATTTCTACCTCTTCTCGTTTTTGATTTTGGCCAATGTAGTCAGCTTGTGGAGCTCGGTGG CCCTGGGTTTCTACGAGGATCCCCAGCTCCTGATTGGGCTAAACCTACTGCTGGGTACGGCCTCGTTTTTGGTGCTCATC CCCTACTTCAGCTTTGTGTTTCACTTCCTACAGCCGACTTCGATTATTCGCCGCATTGAGCAGCAGGTGCAGCAGGCGAT TCTGGGGGCCTCCAGATGGGAACAGCGACAGCCCTCTGCCCTACAACCTTGCGCTGCCGCCCATCAGCGCTGCCTCTCGG CCTTGGATGAAATCAAAAGTATTGCCATCAGCGCCCTGCGCCAACGGGAGGAGGTCATCCTCCTGGAAGCCTTGGATAGC CTAAAGGCCTTGTGGATGTTCTATGCCCAGCACAAGGCGCACCTACCCCGCTCCTGGTTTCTCTGGACGCCAGCGCTGTG CTGA
Upstream 100 bases:
>100_bases CTGGATCCAAGCCGGCTTGGCGTTGGCTCTTGCCCAACCCGTTCGGCAGCCAGGAGCGCTGCAGGAGTTTGTGGTCACCT TGGCCGAGGTGCTGTCGGGG
Downstream 100 bases:
>100_bases AGATCCTGCGGCAGTATCAGGCCCTGTTTACTGAGGGCCTCAATGGCCTGCGGCAAGCAAGGACTCTGGTGGCCATTCAC ACGCGGGAGCTGGGGATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYEDPQLLIGLNLLLGTASFLVLI PYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSALQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDS LKALWMFYAQHKAHLPRSWFLWTPALC
Sequences:
>Translated_187_residues MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYEDPQLLIGLNLLLGTASFLVLI PYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSALQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDS LKALWMFYAQHKAHLPRSWFLWTPALC >Mature_187_residues MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYEDPQLLIGLNLLLGTASFLVLI PYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSALQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDS LKALWMFYAQHKAHLPRSWFLWTPALC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21298; Mature: 21298
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYED CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PQLLIGLNLLLGTASFLVLIPYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDSLKALWMFYAQHKAHLPRSWF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LWTPALC CCCCCCC >Mature Secondary Structure MLGFTLSVVAIVVQLSADRFTPKVTELFLREKTNFYLFSFLILANVVSLWSSVALGFYED CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PQLLIGLNLLLGTASFLVLIPYFSFVFHFLQPTSIIRRIEQQVQQAILGASRWEQRQPSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LQPCAAAHQRCLSALDEIKSIAISALRQREEVILLEALDSLKALWMFYAQHKAHLPRSWF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LWTPALC CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA