Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is yfbI [C]

Identifier: 86605463

GI number: 86605463

Start: 760890

End: 762491

Strand: Reverse

Name: yfbI [C]

Synonym: CYA_0756

Alternate gene names: 86605463

Gene position: 762491-760890 (Counterclockwise)

Preceding gene: 86605464

Following gene: 86605460

Centisome position: 26.0

GC content: 61.86

Gene sequence:

>1602_bases
TTGAGCCTATTGATCGTGGGCCTGGCAGTGCCGCTGTTTGTGCTCTCGGGAGCGGATCCCAGTTTGGCTGGTTGTGACGA
GAGCTTTTACGCCCAGATGGCTCGCGAGCTGCTGCGGGGAGGCAACTGGCTGGGGCCAACTTTTCTGGGAGAGCCTTTTT
TTGAGAAGCCTCCCCTACTTACCTGGAGCGTGGCCCTCAGCTTTGCCCTTTATGGCGTAAACGAGTGGGCGGCGCGGCTG
CCCGGGATCCTGGCGGCTTTGCTTTCCATCCCCCTCATCGGCTGGATTGGGCGGGCCTTTTTGCCAAGCCGGGCGGCCCT
CTTGGGAATGGCAGTTTTGCCCCTGTGCTACCTCTGGGTGCAGCAGGGGCGGCTGGTGGGTCAGGATGTGCCTCTAACCT
GCCTGGAGCTCCTGGGGATCCTAGGCCTAGTGAACGGCATCCGCGGCCACCGGCGCTGGTTCTGGTTGGCGGGAGTGGCC
TTTGGACTGGGCCTTTTGATGAAGAGCGCCATGATCCTGCTGCCGGCGGTGGCTTTGATCCCCTACCTGTGGCAGCAGCG
GCGGCACTGGCTGGGATCTGTCCCCTTTTGGCTGGGGCTTTTGCTGGGCTTGGGAATTTTCGGCCTCTGGCTAGGCCTGG
CCATAAGCCTCTACGGCGCCAAGGTCCTGCTCACCTTAGTAGGGAAGGTGTGGGATCTGGGGCAAGAACCCTTCCATGCC
GATGCCACCGGCTGGTATTACTTTTGGCACATCCCGATCCATGGCTTCCCCTGGACGGTTTTGGCCTTGGTGGGAGGCTG
GCTGCTGCTGCGGCAAAAGCCGGGATCCACCCTGCTGGTTTGGTCTTTCCCCCTGCTGTTGTTTTTGCTCTTGCAGCTCT
ATCCCACCAAAACGCCCTACTACACGGTACAGCTCTATCCCTGGCTAGCTCTCCTAGCGGGGGTGGTTCTGGATCAAGCT
CTGCCCTTTCCGCTCCGCTCCGCCTTGCCGGCAACAGCAGGACGAGGCTCTCGCCGCGACAGACCCCATGTGGCCCAGGT
GCTCTCTTGGGGGCTGGCGGCGGTGGGAACCCTGCTTTTGGGTTTGGGGCTGGCCCTCAAGCGGGATGTTGAGGGACTGG
GTCTGCTCCAACCCCACGCTTGGCCATTGATGGCGATCGGCCTGCTGTATCTGCTCTTGCCGGCAATCTGGAGCTGGCGG
CGGGTGCTGCATTATGCCGGCGAACTCTGGGTGGGCACGCTCCTGGCTGCCAGCATCCTCACCATGGTCAGCATTGTCCT
GCGGCCTGACTTCGGCAATTTCAATCCCGCCTTTGCCCAGATGGACTGGAAACAGATGCTGGGCTCTGCAGACCCTGATT
TTCCCACGGTGGACATTGGCCGCAGCGGCCTAGCGGACGTCTGTCAGGCCCAGGCCCTTGCCTTCTACACCCCCAACCCA
GGACGGTGGGTGGATGACCAGGCCCTGCAAGCAGGGAAACATGGGGATTACCTGTGGGTCTCTCCTGTCCAAGCTCAGCA
GATATCGATCCAGAATCTGGGGCTGCAGCCTTTGGCCGAGGTGGATGGCTGGCAACTGGTGCGCCGCTTGAAAGCGGGGT
AG

Upstream 100 bases:

>100_bases
CCCCAACCGCTTGGGCAGTTCTCCTCGCCGGGGATCCCTGCCCCCAGCCAGCTCTTTTGTCCAGTTTCGCCGCGACCCGC
ATCTGTTTTCCTTTTGGGCT

Downstream 100 bases:

>100_bases
TGGAGGTGAACTCTGCTGCTAGCTACAGGTCGTGGCAGCGAGAAGGTCACTTTGCCATGGGCAAGGTCGGATTCGAACCG
ACACGGTTTCCCGCCGCATT

Product: dolichyl-phosphate-mannose-protein mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARL
PGILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWVQQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVA
FGLGLLMKSAMILLPAVALIPYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHA
DATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPYYTVQLYPWLALLAGVVLDQA
LPFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLLGLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWR
RVLHYAGELWVGTLLAASILTMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNP
GRWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG

Sequences:

>Translated_533_residues
MSLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARL
PGILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWVQQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVA
FGLGLLMKSAMILLPAVALIPYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHA
DATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPYYTVQLYPWLALLAGVVLDQA
LPFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLLGLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWR
RVLHYAGELWVGTLLAASILTMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNP
GRWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG
>Mature_532_residues
SLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLP
GILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWVQQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVAF
GLGLLMKSAMILLPAVALIPYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHAD
ATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPYYTVQLYPWLALLAGVVLDQAL
PFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLLGLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWRR
VLHYAGELWVGTLLAASILTMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNPG
RWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 39 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=300, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: NA

Molecular weight: Translated: 58609; Mature: 58478

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLL
CCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCC
TWSVALSFALYGVNEWAARLPGILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVAFGLGLLMKSAMILLPAVALI
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPY
CCCCEEEEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCE
YTVQLYPWLALLAGVVLDQALPFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLL
EEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWRRVLHYAGELWVGTLLAASIL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNP
HHHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCC
GRWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG
CCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLL
CEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCC
TWSVALSFALYGVNEWAARLPGILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVAFGLGLLMKSAMILLPAVALI
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPY
CCCCEEEEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCE
YTVQLYPWLALLAGVVLDQALPFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLL
EEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWRRVLHYAGELWVGTLLAASIL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNP
HHHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCC
GRWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG
CCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]