| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is yfbI [C]
Identifier: 86605463
GI number: 86605463
Start: 760890
End: 762491
Strand: Reverse
Name: yfbI [C]
Synonym: CYA_0756
Alternate gene names: 86605463
Gene position: 762491-760890 (Counterclockwise)
Preceding gene: 86605464
Following gene: 86605460
Centisome position: 26.0
GC content: 61.86
Gene sequence:
>1602_bases TTGAGCCTATTGATCGTGGGCCTGGCAGTGCCGCTGTTTGTGCTCTCGGGAGCGGATCCCAGTTTGGCTGGTTGTGACGA GAGCTTTTACGCCCAGATGGCTCGCGAGCTGCTGCGGGGAGGCAACTGGCTGGGGCCAACTTTTCTGGGAGAGCCTTTTT TTGAGAAGCCTCCCCTACTTACCTGGAGCGTGGCCCTCAGCTTTGCCCTTTATGGCGTAAACGAGTGGGCGGCGCGGCTG CCCGGGATCCTGGCGGCTTTGCTTTCCATCCCCCTCATCGGCTGGATTGGGCGGGCCTTTTTGCCAAGCCGGGCGGCCCT CTTGGGAATGGCAGTTTTGCCCCTGTGCTACCTCTGGGTGCAGCAGGGGCGGCTGGTGGGTCAGGATGTGCCTCTAACCT GCCTGGAGCTCCTGGGGATCCTAGGCCTAGTGAACGGCATCCGCGGCCACCGGCGCTGGTTCTGGTTGGCGGGAGTGGCC TTTGGACTGGGCCTTTTGATGAAGAGCGCCATGATCCTGCTGCCGGCGGTGGCTTTGATCCCCTACCTGTGGCAGCAGCG GCGGCACTGGCTGGGATCTGTCCCCTTTTGGCTGGGGCTTTTGCTGGGCTTGGGAATTTTCGGCCTCTGGCTAGGCCTGG CCATAAGCCTCTACGGCGCCAAGGTCCTGCTCACCTTAGTAGGGAAGGTGTGGGATCTGGGGCAAGAACCCTTCCATGCC GATGCCACCGGCTGGTATTACTTTTGGCACATCCCGATCCATGGCTTCCCCTGGACGGTTTTGGCCTTGGTGGGAGGCTG GCTGCTGCTGCGGCAAAAGCCGGGATCCACCCTGCTGGTTTGGTCTTTCCCCCTGCTGTTGTTTTTGCTCTTGCAGCTCT ATCCCACCAAAACGCCCTACTACACGGTACAGCTCTATCCCTGGCTAGCTCTCCTAGCGGGGGTGGTTCTGGATCAAGCT CTGCCCTTTCCGCTCCGCTCCGCCTTGCCGGCAACAGCAGGACGAGGCTCTCGCCGCGACAGACCCCATGTGGCCCAGGT GCTCTCTTGGGGGCTGGCGGCGGTGGGAACCCTGCTTTTGGGTTTGGGGCTGGCCCTCAAGCGGGATGTTGAGGGACTGG GTCTGCTCCAACCCCACGCTTGGCCATTGATGGCGATCGGCCTGCTGTATCTGCTCTTGCCGGCAATCTGGAGCTGGCGG CGGGTGCTGCATTATGCCGGCGAACTCTGGGTGGGCACGCTCCTGGCTGCCAGCATCCTCACCATGGTCAGCATTGTCCT GCGGCCTGACTTCGGCAATTTCAATCCCGCCTTTGCCCAGATGGACTGGAAACAGATGCTGGGCTCTGCAGACCCTGATT TTCCCACGGTGGACATTGGCCGCAGCGGCCTAGCGGACGTCTGTCAGGCCCAGGCCCTTGCCTTCTACACCCCCAACCCA GGACGGTGGGTGGATGACCAGGCCCTGCAAGCAGGGAAACATGGGGATTACCTGTGGGTCTCTCCTGTCCAAGCTCAGCA GATATCGATCCAGAATCTGGGGCTGCAGCCTTTGGCCGAGGTGGATGGCTGGCAACTGGTGCGCCGCTTGAAAGCGGGGT AG
Upstream 100 bases:
>100_bases CCCCAACCGCTTGGGCAGTTCTCCTCGCCGGGGATCCCTGCCCCCAGCCAGCTCTTTTGTCCAGTTTCGCCGCGACCCGC ATCTGTTTTCCTTTTGGGCT
Downstream 100 bases:
>100_bases TGGAGGTGAACTCTGCTGCTAGCTACAGGTCGTGGCAGCGAGAAGGTCACTTTGCCATGGGCAAGGTCGGATTCGAACCG ACACGGTTTCCCGCCGCATT
Product: dolichyl-phosphate-mannose-protein mannosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MSLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARL PGILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWVQQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVA FGLGLLMKSAMILLPAVALIPYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHA DATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPYYTVQLYPWLALLAGVVLDQA LPFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLLGLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWR RVLHYAGELWVGTLLAASILTMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNP GRWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG
Sequences:
>Translated_533_residues MSLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARL PGILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWVQQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVA FGLGLLMKSAMILLPAVALIPYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHA DATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPYYTVQLYPWLALLAGVVLDQA LPFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLLGLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWR RVLHYAGELWVGTLLAASILTMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNP GRWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG >Mature_532_residues SLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLP GILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWVQQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVAF GLGLLMKSAMILLPAVALIPYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHAD ATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPYYTVQLYPWLALLAGVVLDQAL PFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLLGLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWRR VLHYAGELWVGTLLAASILTMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNPG RWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 39 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=300, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 58609; Mature: 58478
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLL CCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCC TWSVALSFALYGVNEWAARLPGILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH QQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVAFGLGLLMKSAMILLPAVALI HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPY CCCCEEEEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCE YTVQLYPWLALLAGVVLDQALPFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLL EEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWRRVLHYAGELWVGTLLAASIL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNP HHHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCC GRWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG CCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHCC >Mature Secondary Structure SLLIVGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGGNWLGPTFLGEPFFEKPPLL CEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCC TWSVALSFALYGVNEWAARLPGILAALLSIPLIGWIGRAFLPSRAALLGMAVLPLCYLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH QQGRLVGQDVPLTCLELLGILGLVNGIRGHRRWFWLAGVAFGLGLLMKSAMILLPAVALI HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PYLWQQRRHWLGSVPFWLGLLLGLGIFGLWLGLAISLYGAKVLLTLVGKVWDLGQEPFHA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DATGWYYFWHIPIHGFPWTVLALVGGWLLLRQKPGSTLLVWSFPLLLFLLLQLYPTKTPY CCCCEEEEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCE YTVQLYPWLALLAGVVLDQALPFPLRSALPATAGRGSRRDRPHVAQVLSWGLAAVGTLLL EEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GLGLALKRDVEGLGLLQPHAWPLMAIGLLYLLLPAIWSWRRVLHYAGELWVGTLLAASIL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMVSIVLRPDFGNFNPAFAQMDWKQMLGSADPDFPTVDIGRSGLADVCQAQALAFYTPNP HHHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCC GRWVDDQALQAGKHGDYLWVSPVQAQQISIQNLGLQPLAEVDGWQLVRRLKAG CCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]