| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605464
Identifier: 86605464
GI number: 86605464
Start: 762688
End: 763470
Strand: Reverse
Name: 86605464
Synonym: CYA_0757
Alternate gene names: NA
Gene position: 763470-762688 (Counterclockwise)
Preceding gene: 86605465
Following gene: 86605463
Centisome position: 26.03
GC content: 58.88
Gene sequence:
>783_bases GTGCTGAAGATCCTGCGGCAGTATCAGGCCCTGTTTACTGAGGGCCTCAATGGCCTGCGGCAAGCAAGGACTCTGGTGGC CATTCACACGCGGGAGCTGGGGATCCGCGCCCTGCAAAGCCGAGAGCTCCGGCTGGTCGGCTGGGTGATCAAGTTCTTCA ACACCTACCTGCGGGCGGTGATCAACGCACGGGATATCCGCAGCGGCTACAACCTGCTCAAGCAGTACCGTTTGCTGGCC GAGGCCGCTTTGCGCCATCAGCAGTCGGCGTTGGTCTTGGAGATGGTCGGCCATTTTCGCTACTACAGCCTAGTGGCCTA CAAGGCCGGCTTACTTTTCCTTTCTGAAACCTTTGGCTTTGACCTAGGGGTGCTGGCCCAACTCAGCTGCGCGCTGCAGT CAGAGACAACGGAGGCCATCCTACAAGTCCTGCTCCACCTGGACCAAGACCCGGAAAGCGAGCAGCAGGAAATGACCCTG CGCGGGATCCGGAAAACCCAGGCGCGGCTAGCAGCCTATTTCCTTAGCCGTGGGCGGGAGGATTTGGCCAGGCTGATCTA TGAGGATATGCAACAGGAGCCTTTGGCCCGACTGCAGATCATCCGCCAGGAACTTCACTCCACTGCTTCTGAGTTTTGGG AGTTTACGGATCGGGCGGAGAACTTCTACTACCTGGAGCCTGCCCTTCGACCTTATGCCGAGCAGTTTTTCAGCTGGTTT CAGGGACTAACCTCTCTGCCAGCCAGCCTGGAGGGCGTTCCTGGATCCCTGGAGCTTCCGTAA
Upstream 100 bases:
>100_bases TCCTCCTGGAAGCCTTGGATAGCCTAAAGGCCTTGTGGATGTTCTATGCCCAGCACAAGGCGCACCTACCCCGCTCCTGG TTTCTCTGGACGCCAGCGCT
Downstream 100 bases:
>100_bases AAAGAAAAGGCCAGATCTCCTTCTGCAGAGTCTAGTCTGGTTAGAGCCGCCACTTGGTGCCGTTCCAGAGGGCTTGTTCA TGCGTCCCTTCGGCAACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAVINARDIRSGYNLLKQYRLLA EAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGFDLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTL RGIRKTQARLAAYFLSRGREDLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF QGLTSLPASLEGVPGSLELP
Sequences:
>Translated_260_residues MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAVINARDIRSGYNLLKQYRLLA EAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGFDLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTL RGIRKTQARLAAYFLSRGREDLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF QGLTSLPASLEGVPGSLELP >Mature_260_residues MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAVINARDIRSGYNLLKQYRLLA EAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGFDLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTL RGIRKTQARLAAYFLSRGREDLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF QGLTSLPASLEGVPGSLELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30025; Mature: 30025
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH INARDIRSGYNLLKQYRLLAEAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTLRGIRKTQARLAAYFLSRGRE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH DLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHH QGLTSLPASLEGVPGSLELP HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLKILRQYQALFTEGLNGLRQARTLVAIHTRELGIRALQSRELRLVGWVIKFFNTYLRAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH INARDIRSGYNLLKQYRLLAEAALRHQQSALVLEMVGHFRYYSLVAYKAGLLFLSETFGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DLGVLAQLSCALQSETTEAILQVLLHLDQDPESEQQEMTLRGIRKTQARLAAYFLSRGRE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH DLARLIYEDMQQEPLARLQIIRQELHSTASEFWEFTDRAENFYYLEPALRPYAEQFFSWF HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHH QGLTSLPASLEGVPGSLELP HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA