The gene/protein map for NC_007775 is currently unavailable.
Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605377

Identifier: 86605377

GI number: 86605377

Start: 672502

End: 674634

Strand: Reverse

Name: 86605377

Synonym: CYA_0663

Alternate gene names: NA

Gene position: 674634-672502 (Counterclockwise)

Preceding gene: 86605378

Following gene: 86605374

Centisome position: 23.0

GC content: 63.24

Gene sequence:

>2133_bases
ATGGAAAGGCGGTCTTTTCTACAAAAGTTACTCCTGGTTGCTGCCGGCCTTGGTCTCTCTCCCGGCTGGTTGGTGGGTCA
GGCTGAGCGCTACGGGCAAGCTTTGGCGGCCAGCTCCCGCAAGTTGGCTCTCTTGATAGGCATTAACCGCTACCCCGGCG
AGGGATCCCCGTTACAGGGGTGTGTCACGGATGTGGAGCTGCAGCGGGAGCTGCTGCGGTATCGCTTTGGCTTTGACCCG
GCAGACATTCTCATCCTCACCGATGGAGCTGCCACTTCAAGCGCGATCCAGTCAGCCTTTGCCGAGCACTTGGGAAGTGC
AAGTCAGACGGCTGAAACGGTAGTGGTGCAGTTTAGCGGCTACGGCCAATGGCGGGCGGGATCTTCGCCCGAGCGCTGGC
AGCCGGCGCTGCTGTTGGCTGGCCCTGAAGAAGCGGCGGCTATGGGTCTGGAGCGCTTTTTCCAGCTTGTGCAAAGCTTG
GGCACAGCCCAGCTCACGACCGTACTCGATTGTGGCTTTACCTATGTTGCACCCGCAGTACGGGGCAACTTGCAACTGCG
CTCCCGCCCGCCGAAAGTCCCCAAGGAAGTAGCCTCTACCTCCCCAGAGGCGGTGGCTCCCGGTCGCCTGCCTTCTGGTG
AAGTGCAGCAGATTTGGCCCTCTCCGCCCAAGGGGTTGTTAATTGCCGCCACCACCCCCCAAGATTTGGCGGCAGAAGCC
GCTTGGCCGGGATTTCATGCAGGGATACTCACCTACCTGTTGACGCAGTACCTGTGGGAGACCACACCTGCCACCCGCCT
GCTGATAGCCTTCAACCAAGTGGCCGGTCAGCGGGAGCTGGGCCTGTTTGCTTGTCAGCGCCCCATCCTGGAGGGCAAAG
AAACGGCTCGGCGCATCCCGCCCTACTTCCTCACCCCCCCTCAGGTGGGAGTCAGCGGCGCCATCCAGGAAGTGAAGGGG
AATCGGGCCCAGGTGTGGCTGGGTGGGATCCCACCGGCGGCACTCTGCGGCTTGCAGCCAGGTACTCTTTTGGTTCCCAT
TGCTGCCGAGCCTTCCACCGCCTCGCCGGTGCCGCTGCTGATTCGTTCTCGCAGCGGCCTGTTGGCACAGGTGCAGCCGG
CCAACGGGGAAGGTCAATTTCCCCCCGTGGGCACGCTGGTGCGGGAGCAGTTGCGCAGCCTCTCCAGCAGCCTCAAGCTT
TTGGTGGGTCTGGAAGACAACTTAGGCCGCGTTGAAAAAGTAGATCTGACCAACGCCATCGCCGGCTACAGCTGGATGGA
GACGGCCAACCCGCGCGAGCGCCAGGTGGATTGCCTGCTGGGCCGCATCACCCCCGAAATGGCCGCCGCCTTTCAATTGG
ACGCTCTGCCCAAACCCCTGGAAGTCAACAGCTACAGCCTCTTTTGGCCGGGGCGAGAATTGCTGCTCAATTCCTGCGGG
CCGGCTGGGGAAGCTGCCGCTACGGCAGTGCAGCGGCTGGTGCCCCGTCTGGCCCATCTGCTGGCGGCCAAGCGCCTGCG
GGCTACCCTCAACGCGGCAATCTCGCCGCTGGCGGTGGTGGGGGAATTGTCCACCAAGGGCAAACCCTTGCGGGGGTCAC
GGCTTGCCCAAGGGGCCGCTGCTCCTGGCGAGCCAGGCATGCCACGCTTTATGCGCGGGGATCCCCTCTATCTCACTCTG
CGCAACGAGGGCGAGCAGGATCTGTTCGGGTACCTGTTGATGGTCGATTCCAGCGGGCAACTGCACCTGCTGGCCCCCAT
GCCCCAGGAGGACTTTGCCCTGCCGCTGCGCCTGGAGGCCAAGAGCAGCCTGACTTTGCCACCTCTGCCTGAGATGGCTG
GCAATTCGCGCTCTGCCGTCAATCCCGATCTGCTCACCTGCCATGCCCAGGGGCTGACCGAGCTGCTGTTTGTGGCCAGC
ACTCGCCCCTTGTCGGCCAGCTTGGAAGCCCTCAAAACCATGGCCCGCAAGCTGGGGGTAGCCCGTTCGCCGCTGTTGCT
CAATGGGCCGCTGGAATGGACGCAAATTCTCCTCGAGGAGTTGACCCAGCGTGCCCCCGAAGGGGATCCCGACTTGCGCT
GGCTGGATCCCGGCCAGGCTGTTACCCTTTCCCTCACCTATTTGCTGGTTTAG

Upstream 100 bases:

>100_bases
ATCCTGAAATAGGCAGCAACAGATCCGGTGCAGAGTTGAGCTGTGGCTCGTTCGCCAACAGGGTGGCTGTTACGCCAGCG
AGGCAGCCCACAGGGTTGAC

Downstream 100 bases:

>100_bases
CTCAGCAACAGGGCAAACAGGCCACAGAGAGCAATGCCATCGAAAACCCCGGCCCCGCCAATGCTGAGAATGCCCGAGCA
ATTGCGCCGCAGCACCTCCG

Product: ICE-like protease

Products: NA

Alternate protein names: Caspase Domain Protein; ICE-Like Protease; C14 Family Peptidase; Caspase Domain-Containing Protein; Protease

Number of amino acids: Translated: 710; Mature: 710

Protein sequence:

>710_residues
MERRSFLQKLLLVAAGLGLSPGWLVGQAERYGQALAASSRKLALLIGINRYPGEGSPLQGCVTDVELQRELLRYRFGFDP
ADILILTDGAATSSAIQSAFAEHLGSASQTAETVVVQFSGYGQWRAGSSPERWQPALLLAGPEEAAAMGLERFFQLVQSL
GTAQLTTVLDCGFTYVAPAVRGNLQLRSRPPKVPKEVASTSPEAVAPGRLPSGEVQQIWPSPPKGLLIAATTPQDLAAEA
AWPGFHAGILTYLLTQYLWETTPATRLLIAFNQVAGQRELGLFACQRPILEGKETARRIPPYFLTPPQVGVSGAIQEVKG
NRAQVWLGGIPPAALCGLQPGTLLVPIAAEPSTASPVPLLIRSRSGLLAQVQPANGEGQFPPVGTLVREQLRSLSSSLKL
LVGLEDNLGRVEKVDLTNAIAGYSWMETANPRERQVDCLLGRITPEMAAAFQLDALPKPLEVNSYSLFWPGRELLLNSCG
PAGEAAATAVQRLVPRLAHLLAAKRLRATLNAAISPLAVVGELSTKGKPLRGSRLAQGAAAPGEPGMPRFMRGDPLYLTL
RNEGEQDLFGYLLMVDSSGQLHLLAPMPQEDFALPLRLEAKSSLTLPPLPEMAGNSRSAVNPDLLTCHAQGLTELLFVAS
TRPLSASLEALKTMARKLGVARSPLLLNGPLEWTQILLEELTQRAPEGDPDLRWLDPGQAVTLSLTYLLV

Sequences:

>Translated_710_residues
MERRSFLQKLLLVAAGLGLSPGWLVGQAERYGQALAASSRKLALLIGINRYPGEGSPLQGCVTDVELQRELLRYRFGFDP
ADILILTDGAATSSAIQSAFAEHLGSASQTAETVVVQFSGYGQWRAGSSPERWQPALLLAGPEEAAAMGLERFFQLVQSL
GTAQLTTVLDCGFTYVAPAVRGNLQLRSRPPKVPKEVASTSPEAVAPGRLPSGEVQQIWPSPPKGLLIAATTPQDLAAEA
AWPGFHAGILTYLLTQYLWETTPATRLLIAFNQVAGQRELGLFACQRPILEGKETARRIPPYFLTPPQVGVSGAIQEVKG
NRAQVWLGGIPPAALCGLQPGTLLVPIAAEPSTASPVPLLIRSRSGLLAQVQPANGEGQFPPVGTLVREQLRSLSSSLKL
LVGLEDNLGRVEKVDLTNAIAGYSWMETANPRERQVDCLLGRITPEMAAAFQLDALPKPLEVNSYSLFWPGRELLLNSCG
PAGEAAATAVQRLVPRLAHLLAAKRLRATLNAAISPLAVVGELSTKGKPLRGSRLAQGAAAPGEPGMPRFMRGDPLYLTL
RNEGEQDLFGYLLMVDSSGQLHLLAPMPQEDFALPLRLEAKSSLTLPPLPEMAGNSRSAVNPDLLTCHAQGLTELLFVAS
TRPLSASLEALKTMARKLGVARSPLLLNGPLEWTQILLEELTQRAPEGDPDLRWLDPGQAVTLSLTYLLV
>Mature_710_residues
MERRSFLQKLLLVAAGLGLSPGWLVGQAERYGQALAASSRKLALLIGINRYPGEGSPLQGCVTDVELQRELLRYRFGFDP
ADILILTDGAATSSAIQSAFAEHLGSASQTAETVVVQFSGYGQWRAGSSPERWQPALLLAGPEEAAAMGLERFFQLVQSL
GTAQLTTVLDCGFTYVAPAVRGNLQLRSRPPKVPKEVASTSPEAVAPGRLPSGEVQQIWPSPPKGLLIAATTPQDLAAEA
AWPGFHAGILTYLLTQYLWETTPATRLLIAFNQVAGQRELGLFACQRPILEGKETARRIPPYFLTPPQVGVSGAIQEVKG
NRAQVWLGGIPPAALCGLQPGTLLVPIAAEPSTASPVPLLIRSRSGLLAQVQPANGEGQFPPVGTLVREQLRSLSSSLKL
LVGLEDNLGRVEKVDLTNAIAGYSWMETANPRERQVDCLLGRITPEMAAAFQLDALPKPLEVNSYSLFWPGRELLLNSCG
PAGEAAATAVQRLVPRLAHLLAAKRLRATLNAAISPLAVVGELSTKGKPLRGSRLAQGAAAPGEPGMPRFMRGDPLYLTL
RNEGEQDLFGYLLMVDSSGQLHLLAPMPQEDFALPLRLEAKSSLTLPPLPEMAGNSRSAVNPDLLTCHAQGLTELLFVAS
TRPLSASLEALKTMARKLGVARSPLLLNGPLEWTQILLEELTQRAPEGDPDLRWLDPGQAVTLSLTYLLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76051; Mature: 76051

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRSFLQKLLLVAAGLGLSPGWLVGQAERYGQALAASSRKLALLIGINRYPGEGSPLQG
CCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH
CVTDVELQRELLRYRFGFDPADILILTDGAATSSAIQSAFAEHLGSASQTAETVVVQFSG
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
YGQWRAGSSPERWQPALLLAGPEEAAAMGLERFFQLVQSLGTAQLTTVLDCGFTYVAPAV
CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH
RGNLQLRSRPPKVPKEVASTSPEAVAPGRLPSGEVQQIWPSPPKGLLIAATTPQDLAAEA
CCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHH
AWPGFHAGILTYLLTQYLWETTPATRLLIAFNQVAGQRELGLFACQRPILEGKETARRIP
CCCCHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHCCCCHHHHHHHHCCHHCCHHHHHHCC
PYFLTPPQVGVSGAIQEVKGNRAQVWLGGIPPAALCGLQPGTLLVPIAAEPSTASPVPLL
CCEECCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCEEE
IRSRSGLLAQVQPANGEGQFPPVGTLVREQLRSLSSSLKLLVGLEDNLGRVEKVDLTNAI
EECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEECHHHHH
AGYSWMETANPRERQVDCLLGRITPEMAAAFQLDALPKPLEVNSYSLFWPGRELLLNSCG
HCCCHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHCCC
PAGEAAATAVQRLVPRLAHLLAAKRLRATLNAAISPLAVVGELSTKGKPLRGSRLAQGAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCCCCCCHHHCCCC
APGEPGMPRFMRGDPLYLTLRNEGEQDLFGYLLMVDSSGQLHLLAPMPQEDFALPLRLEA
CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCEEEEEC
KSSLTLPPLPEMAGNSRSAVNPDLLTCHAQGLTELLFVASTRPLSASLEALKTMARKLGV
CCCCCCCCCHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
ARSPLLLNGPLEWTQILLEELTQRAPEGDPDLRWLDPGQAVTLSLTYLLV
CCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEEEC
>Mature Secondary Structure
MERRSFLQKLLLVAAGLGLSPGWLVGQAERYGQALAASSRKLALLIGINRYPGEGSPLQG
CCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH
CVTDVELQRELLRYRFGFDPADILILTDGAATSSAIQSAFAEHLGSASQTAETVVVQFSG
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
YGQWRAGSSPERWQPALLLAGPEEAAAMGLERFFQLVQSLGTAQLTTVLDCGFTYVAPAV
CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH
RGNLQLRSRPPKVPKEVASTSPEAVAPGRLPSGEVQQIWPSPPKGLLIAATTPQDLAAEA
CCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHH
AWPGFHAGILTYLLTQYLWETTPATRLLIAFNQVAGQRELGLFACQRPILEGKETARRIP
CCCCHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHCCCCHHHHHHHHCCHHCCHHHHHHCC
PYFLTPPQVGVSGAIQEVKGNRAQVWLGGIPPAALCGLQPGTLLVPIAAEPSTASPVPLL
CCEECCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCEEE
IRSRSGLLAQVQPANGEGQFPPVGTLVREQLRSLSSSLKLLVGLEDNLGRVEKVDLTNAI
EECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEECHHHHH
AGYSWMETANPRERQVDCLLGRITPEMAAAFQLDALPKPLEVNSYSLFWPGRELLLNSCG
HCCCHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHCCC
PAGEAAATAVQRLVPRLAHLLAAKRLRATLNAAISPLAVVGELSTKGKPLRGSRLAQGAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCCCCCCHHHCCCC
APGEPGMPRFMRGDPLYLTLRNEGEQDLFGYLLMVDSSGQLHLLAPMPQEDFALPLRLEA
CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCEEEEEC
KSSLTLPPLPEMAGNSRSAVNPDLLTCHAQGLTELLFVASTRPLSASLEALKTMARKLGV
CCCCCCCCCHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
ARSPLLLNGPLEWTQILLEELTQRAPEGDPDLRWLDPGQAVTLSLTYLLV
CCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA