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The map label for this gene is cpcT1

Identifier: 86605374

GI number: 86605374

Start: 669298

End: 669954

Strand: Reverse

Name: cpcT1

Synonym: CYA_0661

Alternate gene names: 86605374

Gene position: 669954-669298 (Counterclockwise)

Preceding gene: 86605377

Following gene: 86605365

Centisome position: 22.84

GC content: 57.84

Gene sequence:

>657_bases
GTGAGAATAACCCTAGGATCGAGAAATCCCGAAGACAGGCGATCCTCCTTCTTGCATATGACAGCTTCTGCTGCGGCAAC
TTCCGATTCCGACCTCAATACTTTTGCCGATTGGCTGGAAGGTTACTACAGCAACCGCGCCCAAGCCATGGCAGAACCGG
TGTGGTTTGTACCGGTGAGCCTTTGGTACGTGCGCCTTCCCCACCTGTTTTCAGAAGGAATCGGCTTTTTTACCGAGCAA
TTTAACGAGCACACGCCGGGCCGGTTTTACCGCAGCCGGGTGCTGCAGGTATTGGCGGATCCCTTGCGGATCGAGAACTA
TAAGTTGCGGGATCAAGCGGCTTGGGCAGGTGCCTCTCAGGATCTGCAGCGCTTGGCGCAGCTTTCTCTGTCTGACTTGC
AGCATTTGCCCGGTTGTCGCATCCTCGTAGAAAAGCGCGCAGACTGCTACCACGGCCAGATGCTGCCGGGCGGTGGCTGC
CGCCTCAACCCCGGCGACAGCACCTACATCCACATCGAGTTTGACCTCACAGCCCAGGAATTCATCACCTGGGATCGCGG
CTTCGACGCCACCACCGGCCAACAAACTTGGGGATCCCGCGCCGGCCCTTACCGCTACCAGAAAAGGATCCCTGTGGTAT
TTCCCCCTCGCCCCTAA

Upstream 100 bases:

>100_bases
TCTATAGTAGAAGAAAAATTGCCTTCAGCAGAGCAAGCTCCTCAACACTGAGCCCTCCGGTTCGGCACCCAACCTTCTCC
CTCCGGAAGCAGGGTTAGGG

Downstream 100 bases:

>100_bases
GGGTTCGGAAAACTGTTGGGCTAGCTAGGAGGGCTATGGGAACAAAAAAGGAAACAGGTCGCGGAAACCCCTGCGCAGCT
TGAGCAAAAAGATCAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRITLGSRNPEDRRSSFLHMTASAAATSDSDLNTFADWLEGYYSNRAQAMAEPVWFVPVSLWYVRLPHLFSEGIGFFTEQ
FNEHTPGRFYRSRVLQVLADPLRIENYKLRDQAAWAGASQDLQRLAQLSLSDLQHLPGCRILVEKRADCYHGQMLPGGGC
RLNPGDSTYIHIEFDLTAQEFITWDRGFDATTGQQTWGSRAGPYRYQKRIPVVFPPRP

Sequences:

>Translated_218_residues
MRITLGSRNPEDRRSSFLHMTASAAATSDSDLNTFADWLEGYYSNRAQAMAEPVWFVPVSLWYVRLPHLFSEGIGFFTEQ
FNEHTPGRFYRSRVLQVLADPLRIENYKLRDQAAWAGASQDLQRLAQLSLSDLQHLPGCRILVEKRADCYHGQMLPGGGC
RLNPGDSTYIHIEFDLTAQEFITWDRGFDATTGQQTWGSRAGPYRYQKRIPVVFPPRP
>Mature_218_residues
MRITLGSRNPEDRRSSFLHMTASAAATSDSDLNTFADWLEGYYSNRAQAMAEPVWFVPVSLWYVRLPHLFSEGIGFFTEQ
FNEHTPGRFYRSRVLQVLADPLRIENYKLRDQAAWAGASQDLQRLAQLSLSDLQHLPGCRILVEKRADCYHGQMLPGGGC
RLNPGDSTYIHIEFDLTAQEFITWDRGFDATTGQQTWGSRAGPYRYQKRIPVVFPPRP

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcT/CpeT biliprotein lyase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPXT1_SYNJA (Q2JWI9)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_474137.1
- STRING:   Q2JWI9
- GeneID:   3897298
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_0661
- TIGR:   CYA_0661
- eggNOG:   NOG70500
- HOGENOM:   HBG709119
- OMA:   KATWGAI
- ProtClustDB:   CLSK503015
- BioCyc:   SSP321327:CYA_0661-MONOMER
- HAMAP:   MF_01460
- InterPro:   IPR010404

Pfam domain/function: PF06206 DUF1001

EC number: NA

Molecular weight: Translated: 24918; Mature: 24918

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLGSRNPEDRRSSFLHMTASAAATSDSDLNTFADWLEGYYSNRAQAMAEPVWFVPVS
CEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHH
LWYVRLPHLFSEGIGFFTEQFNEHTPGRFYRSRVLQVLADPLRIENYKLRDQAAWAGASQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHCCCHH
DLQRLAQLSLSDLQHLPGCRILVEKRADCYHGQMLPGGGCRLNPGDSTYIHIEFDLTAQE
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCCCCCCEECCCCCEEEEEEECCCHHH
FITWDRGFDATTGQQTWGSRAGPYRYQKRIPVVFPPRP
HHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCC
>Mature Secondary Structure
MRITLGSRNPEDRRSSFLHMTASAAATSDSDLNTFADWLEGYYSNRAQAMAEPVWFVPVS
CEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHH
LWYVRLPHLFSEGIGFFTEQFNEHTPGRFYRSRVLQVLADPLRIENYKLRDQAAWAGASQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHCCCHH
DLQRLAQLSLSDLQHLPGCRILVEKRADCYHGQMLPGGGCRLNPGDSTYIHIEFDLTAQE
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCCCCCCEECCCCCEEEEEEECCCHHH
FITWDRGFDATTGQQTWGSRAGPYRYQKRIPVVFPPRP
HHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA