| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605365
Identifier: 86605365
GI number: 86605365
Start: 659506
End: 659844
Strand: Reverse
Name: 86605365
Synonym: CYA_0650
Alternate gene names: NA
Gene position: 659844-659506 (Counterclockwise)
Preceding gene: 86605374
Following gene: 86605362
Centisome position: 22.5
GC content: 56.34
Gene sequence:
>339_bases TTGGCTGTTGAGGTCGTGCCCAGGGATGTTCCCTACCTCGTCGGGAAGGGTTATATGTACTACGAACAATTGATCAACAT GATCCTGCGGGCCTGCGGCCAAAGCAGCCGCCACGGCCTGGATCAGGAAACGTTGACCCTCTACTCCGAAGGCCCCTACA CCCTCTACAAGCTCACCTCCCATTTCGACCGCCGCTCCATTTTTGTTTTGGCCCAAAACCAGCGGGATATGTTTGTCTCT GGAGATGCGTTTCACAGCAAGCTGATCCCGGGAGAATGGCAGGAGTGGCTGCACCAGAAGGCTTTGGCTGTTGCCGACAA GACACCCCAGGCCAGCTAG
Upstream 100 bases:
>100_bases CGCTGCCTTGGTTGAACTCACCTGCTCTGTTGGGCTCAGTGTTGCCTGAGCCGGGAGTTATACTGGGCTCACGCGAGCCG CTCGGGCCTCAGCAGCCGCC
Downstream 100 bases:
>100_bases CCGGCGAGGGCCAAAACTCCGGGCTGAACCTGCTGGGGCACCACTGAGAGCCGATCCAACTTGGCACAATAGGCCAGGTC GCTGTCGTTTTCGGGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAVEVVPRDVPYLVGKGYMYYEQLINMILRACGQSSRHGLDQETLTLYSEGPYTLYKLTSHFDRRSIFVLAQNQRDMFVS GDAFHSKLIPGEWQEWLHQKALAVADKTPQAS
Sequences:
>Translated_112_residues MAVEVVPRDVPYLVGKGYMYYEQLINMILRACGQSSRHGLDQETLTLYSEGPYTLYKLTSHFDRRSIFVLAQNQRDMFVS GDAFHSKLIPGEWQEWLHQKALAVADKTPQAS >Mature_111_residues AVEVVPRDVPYLVGKGYMYYEQLINMILRACGQSSRHGLDQETLTLYSEGPYTLYKLTSHFDRRSIFVLAQNQRDMFVSG DAFHSKLIPGEWQEWLHQKALAVADKTPQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12854; Mature: 12723
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVEVVPRDVPYLVGKGYMYYEQLINMILRACGQSSRHGLDQETLTLYSEGPYTLYKLTS CCEECCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEHHHH HFDRRSIFVLAQNQRDMFVSGDAFHSKLIPGEWQEWLHQKALAVADKTPQAS CCCCCEEEEEECCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVEVVPRDVPYLVGKGYMYYEQLINMILRACGQSSRHGLDQETLTLYSEGPYTLYKLTS CEECCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEHHHH HFDRRSIFVLAQNQRDMFVSGDAFHSKLIPGEWQEWLHQKALAVADKTPQAS CCCCCEEEEEECCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA