Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605314

Identifier: 86605314

GI number: 86605314

Start: 609477

End: 610247

Strand: Reverse

Name: 86605314

Synonym: CYA_0598

Alternate gene names: NA

Gene position: 610247-609477 (Counterclockwise)

Preceding gene: 86605333

Following gene: 86605302

Centisome position: 20.81

GC content: 54.09

Gene sequence:

>771_bases
ATGGCCATGCGGCGGGATTTACAAGAGCTGGTCATTTCCCCTTTTCTGGTGGAAAACCTTTCTGGGGTACCCATAGCCTG
GCTGTACCGACCTCGGCCTATCCGTCGCTGGAAAGACTGGCTGCGCCAGTTCTCCGCCTTTTGGGATCTGCTGGGCCTGC
TGTTGGTGCTGGATTTGTTCTGCCGTTTCTTGACCTTTTGGTCAGGGGGATCCCTGCTGACCTTGGTGGGGCGAATTTTG
ATCCCTGGCCTGCGCAGCAGTTGGGAAAGTTGGCTGGTGGAATGGGGAATCCTGACAGCCATTGCCGCTTTGGGCCAAGC
CTATTGGATTTTCCGCAGCCGCCGCATGCCGCTCTTGCTGAACTTGCTAGAAGAAGTAGATCGCTACAATCGGCTCATTC
AAGCCATTCACATCAACGATGAATTGGTAGAGGCGGGCAATCCTGAGGCCAAGCTGCCCCAGCGGGATCAGATCATCGAG
GCTCTGAAGCTGACTCGCAGCGACCTAATCCGCGCCTTGAAAACTGAACGGATCTTGCGGCAGAACAAAGACTTTATTGA
GCAGCAAAGGGAGTTCTTCGGCGACGAGCTGGCAGCTCTGACTGCGCTCCAGCTAAGAGAACAGGCCAGCGAACAGTCGC
AGCTTTTGGATGCTGCTTTGCAAATTGCCTTGCAGGTGCGCTCCCAACTAAGCCAACTGCAGAACCGGGGAGCAAATTGT
TCCCAAGACAAAGATCAAGCTTCAGACAAAGCTCGAGACAAAAAAGATTAA

Upstream 100 bases:

>100_bases
TCTCCTCTTTGGCCAGCTTTTACCCCTGAGAAGGGATCTCAGCAGGATCTCAGGTGCCGGCAGTAGAATTGGGTGGAAAA
CTTAGCCCTTGGCAGAGTCC

Downstream 100 bases:

>100_bases
AGCGAAGACACAAGTTACAGCTATTTCGACCAGGATACTGCACTGATATTGAAGTAACCAAAGCCTTGGACTACGGGAAA
GTCGTTGTGAGGCTCTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MAMRRDLQELVISPFLVENLSGVPIAWLYRPRPIRRWKDWLRQFSAFWDLLGLLLVLDLFCRFLTFWSGGSLLTLVGRIL
IPGLRSSWESWLVEWGILTAIAALGQAYWIFRSRRMPLLLNLLEEVDRYNRLIQAIHINDELVEAGNPEAKLPQRDQIIE
ALKLTRSDLIRALKTERILRQNKDFIEQQREFFGDELAALTALQLREQASEQSQLLDAALQIALQVRSQLSQLQNRGANC
SQDKDQASDKARDKKD

Sequences:

>Translated_256_residues
MAMRRDLQELVISPFLVENLSGVPIAWLYRPRPIRRWKDWLRQFSAFWDLLGLLLVLDLFCRFLTFWSGGSLLTLVGRIL
IPGLRSSWESWLVEWGILTAIAALGQAYWIFRSRRMPLLLNLLEEVDRYNRLIQAIHINDELVEAGNPEAKLPQRDQIIE
ALKLTRSDLIRALKTERILRQNKDFIEQQREFFGDELAALTALQLREQASEQSQLLDAALQIALQVRSQLSQLQNRGANC
SQDKDQASDKARDKKD
>Mature_255_residues
AMRRDLQELVISPFLVENLSGVPIAWLYRPRPIRRWKDWLRQFSAFWDLLGLLLVLDLFCRFLTFWSGGSLLTLVGRILI
PGLRSSWESWLVEWGILTAIAALGQAYWIFRSRRMPLLLNLLEEVDRYNRLIQAIHINDELVEAGNPEAKLPQRDQIIEA
LKLTRSDLIRALKTERILRQNKDFIEQQREFFGDELAALTALQLREQASEQSQLLDAALQIALQVRSQLSQLQNRGANCS
QDKDQASDKARDKKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29710; Mature: 29579

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMRRDLQELVISPFLVENLSGVPIAWLYRPRPIRRWKDWLRQFSAFWDLLGLLLVLDLF
CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRFLTFWSGGSLLTLVGRILIPGLRSSWESWLVEWGILTAIAALGQAYWIFRSRRMPLLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
NLLEEVDRYNRLIQAIHINDELVEAGNPEAKLPQRDQIIEALKLTRSDLIRALKTERILR
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QNKDFIEQQREFFGDELAALTALQLREQASEQSQLLDAALQIALQVRSQLSQLQNRGANC
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SQDKDQASDKARDKKD
CCHHHHHHHHHCCCCC
>Mature Secondary Structure 
AMRRDLQELVISPFLVENLSGVPIAWLYRPRPIRRWKDWLRQFSAFWDLLGLLLVLDLF
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRFLTFWSGGSLLTLVGRILIPGLRSSWESWLVEWGILTAIAALGQAYWIFRSRRMPLLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
NLLEEVDRYNRLIQAIHINDELVEAGNPEAKLPQRDQIIEALKLTRSDLIRALKTERILR
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QNKDFIEQQREFFGDELAALTALQLREQASEQSQLLDAALQIALQVRSQLSQLQNRGANC
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SQDKDQASDKARDKKD
CCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA