Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605302

Identifier: 86605302

GI number: 86605302

Start: 597478

End: 598887

Strand: Reverse

Name: 86605302

Synonym: CYA_0586

Alternate gene names: NA

Gene position: 598887-597478 (Counterclockwise)

Preceding gene: 86605314

Following gene: 86605301

Centisome position: 20.42

GC content: 63.76

Gene sequence:

>1410_bases
ATGGCTCGCCGCAACACCCTACAAGATGACCTCAACTACCAACAAGCCAAGCGCAGCCTGCGCCAGTGGGTGGCCCAACT
GGATCTGCGCCCCCAAGAGGTCGCGGGCTTAGAAGGGGAGTTGGAGAGCTTGCAAGCGCTCTTGGACAAGCTGGAAACCG
AGGTCATCCACATCGCCGCCTTTGGTCTGGTGGGGCGAGGCAAGTCTTCCCTGCTCAATGCCCTGCTGGGCGAGCCAGTC
TTTGAGACGGGGCCCACCCATGGCATCACCCGTACCCAGCAAGCGGCAACTTGGAACATCAGCTGGGAAACCCGCCCCCA
GTCCTCCTTCTCTGGCACATCCCTGCAGGGATCCCGCCTCCCCCCTTCCTCGGTGCAGTCGGTACAGGTCGCCCATTGGC
AGGGATCCCGTCTGGAGCTGATCGACACTCCCGGCCTGGATGAAGTAGACGGCGAAGAGCGGGCGCGGCTGGCCCGAGAA
GTGGCGCAGCGGGCGGATTTGATCCTGTTTGTCGTCTGCGGGGATCTGACGCGGGTGGAGTTTGAGGCTCTGGCCACCCT
GCGGGAGGCGGGCAAGCCTATGCTGCTGGTGTTCAACAAGATCGACCAGTACCCAGAGGCAGATCGCCAGGCCATCTACG
ACAAGATCCGCAACGAACGGGTGCGGCAGCTCCTTTCTCCCAACGAGATCGTCATGGTGGCGGCCTCCCCTCGCGTGCCC
CGCCTGGTGCAAAGGCCGGATGGGAGCTTTGCTGCCCAGATGGAAGTGGGATCCCCGCAGGTGGATGAGCTGCGCCTGAA
AATCCTGGAAGTCCTGCATCGGGAGGGGCGCTCCCTGCTGGCCTTGAATGCCCTCCTGTTTGCCGATCGCGTCAACCAAC
AGGTCATCGAGCGCAAGCTGCAAAGCCGCGCCCAGCAAGCCCAAGACCTCATCGCCTCAGCCGCCCGCACCAAAGCGCTG
GCGGTTGCCCTCAACCCCGTTACCCTGCTCGATACCTTGGGAGGGCTGGCCCTGGATATTGCCTTGATCCTGCGCCTGTC
CCGCCTCTATGGCTGGCCCATGAGCAGCGCGGGAGCCGCACAACTGCTGCAGAAGATCGTCCTCAGCATGCTCAGCCTGG
GCGCCGGCGAGTGGGTGGCGCTGTTGGGCCTGGGATCCCTGAAAACCTTGCTGGGAGGATTCTCTCTGGGGGCCTACGGT
TCCGTGGCCCTGACGCAGGCGGTGTTGGCCGGGTTTTCCTGCTATGCCATCGGCGAGTCCGCCCGCCACTACCTGGCCCA
GGGAGCCAGTTGGGGGCCAGAGGGCCCCAAAGCCGCCATAGCCCAGATTTTGGCCGATTTGGACGAAGCCTCGATCACCG
CCCGCCTGCGGGAGGAAATCCGCCACAAAATCGGATTTGCTTTCCCCTGA

Upstream 100 bases:

>100_bases
CCGATGAGAAGCTCTCTGTCTGGTGGGGAAGCCTGCCGATCCCGAGAGCAAAGTGGAGTCTTTTAAGGGCTGCTTCCTAC
CGCTATTGAGCGCTACGGCT

Downstream 100 bases:

>100_bases
ACCTCTACAATCGCCTCTACAATCCCTCTACAATCAGAGAGCCGAGCCGCATCGTTCGCATGACCTACTGCCTTGGCATC
ATCACCCGCTTTGGCTTGGT

Product: GTP-binding domain-containing protein

Products: NA

Alternate protein names: Membrane Associated GTPase; GTPase SAR1 And Related Small G Proteins; GTPase SAR1 And Related Small G Protein

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPV
FETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLARE
VAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVP
RLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKLQSRAQQAQDLIASAARTKAL
AVALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAAQLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYG
SVALTQAVLAGFSCYAIGESARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP

Sequences:

>Translated_469_residues
MARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPV
FETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLARE
VAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVP
RLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKLQSRAQQAQDLIASAARTKAL
AVALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAAQLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYG
SVALTQAVLAGFSCYAIGESARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP
>Mature_468_residues
ARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPVF
ETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLAREV
AQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVPR
LVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKLQSRAQQAQDLIASAARTKALA
VALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAAQLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYGS
VALTQAVLAGFSCYAIGESARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51136; Mature: 51005

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAA
CCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRL
HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
PPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVE
CCCHHCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHH
FEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVP
HHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
RLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKL
HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QSRAQQAQDLIASAARTKALAVALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAA
HHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGES
HHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHEEHHHH
ARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAA
CCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRL
HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
PPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVE
CCCHHCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHH
FEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVP
HHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
RLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKL
HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QSRAQQAQDLIASAARTKALAVALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAA
HHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGES
HHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHEEHHHH
ARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA