| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605302
Identifier: 86605302
GI number: 86605302
Start: 597478
End: 598887
Strand: Reverse
Name: 86605302
Synonym: CYA_0586
Alternate gene names: NA
Gene position: 598887-597478 (Counterclockwise)
Preceding gene: 86605314
Following gene: 86605301
Centisome position: 20.42
GC content: 63.76
Gene sequence:
>1410_bases ATGGCTCGCCGCAACACCCTACAAGATGACCTCAACTACCAACAAGCCAAGCGCAGCCTGCGCCAGTGGGTGGCCCAACT GGATCTGCGCCCCCAAGAGGTCGCGGGCTTAGAAGGGGAGTTGGAGAGCTTGCAAGCGCTCTTGGACAAGCTGGAAACCG AGGTCATCCACATCGCCGCCTTTGGTCTGGTGGGGCGAGGCAAGTCTTCCCTGCTCAATGCCCTGCTGGGCGAGCCAGTC TTTGAGACGGGGCCCACCCATGGCATCACCCGTACCCAGCAAGCGGCAACTTGGAACATCAGCTGGGAAACCCGCCCCCA GTCCTCCTTCTCTGGCACATCCCTGCAGGGATCCCGCCTCCCCCCTTCCTCGGTGCAGTCGGTACAGGTCGCCCATTGGC AGGGATCCCGTCTGGAGCTGATCGACACTCCCGGCCTGGATGAAGTAGACGGCGAAGAGCGGGCGCGGCTGGCCCGAGAA GTGGCGCAGCGGGCGGATTTGATCCTGTTTGTCGTCTGCGGGGATCTGACGCGGGTGGAGTTTGAGGCTCTGGCCACCCT GCGGGAGGCGGGCAAGCCTATGCTGCTGGTGTTCAACAAGATCGACCAGTACCCAGAGGCAGATCGCCAGGCCATCTACG ACAAGATCCGCAACGAACGGGTGCGGCAGCTCCTTTCTCCCAACGAGATCGTCATGGTGGCGGCCTCCCCTCGCGTGCCC CGCCTGGTGCAAAGGCCGGATGGGAGCTTTGCTGCCCAGATGGAAGTGGGATCCCCGCAGGTGGATGAGCTGCGCCTGAA AATCCTGGAAGTCCTGCATCGGGAGGGGCGCTCCCTGCTGGCCTTGAATGCCCTCCTGTTTGCCGATCGCGTCAACCAAC AGGTCATCGAGCGCAAGCTGCAAAGCCGCGCCCAGCAAGCCCAAGACCTCATCGCCTCAGCCGCCCGCACCAAAGCGCTG GCGGTTGCCCTCAACCCCGTTACCCTGCTCGATACCTTGGGAGGGCTGGCCCTGGATATTGCCTTGATCCTGCGCCTGTC CCGCCTCTATGGCTGGCCCATGAGCAGCGCGGGAGCCGCACAACTGCTGCAGAAGATCGTCCTCAGCATGCTCAGCCTGG GCGCCGGCGAGTGGGTGGCGCTGTTGGGCCTGGGATCCCTGAAAACCTTGCTGGGAGGATTCTCTCTGGGGGCCTACGGT TCCGTGGCCCTGACGCAGGCGGTGTTGGCCGGGTTTTCCTGCTATGCCATCGGCGAGTCCGCCCGCCACTACCTGGCCCA GGGAGCCAGTTGGGGGCCAGAGGGCCCCAAAGCCGCCATAGCCCAGATTTTGGCCGATTTGGACGAAGCCTCGATCACCG CCCGCCTGCGGGAGGAAATCCGCCACAAAATCGGATTTGCTTTCCCCTGA
Upstream 100 bases:
>100_bases CCGATGAGAAGCTCTCTGTCTGGTGGGGAAGCCTGCCGATCCCGAGAGCAAAGTGGAGTCTTTTAAGGGCTGCTTCCTAC CGCTATTGAGCGCTACGGCT
Downstream 100 bases:
>100_bases ACCTCTACAATCGCCTCTACAATCCCTCTACAATCAGAGAGCCGAGCCGCATCGTTCGCATGACCTACTGCCTTGGCATC ATCACCCGCTTTGGCTTGGT
Product: GTP-binding domain-containing protein
Products: NA
Alternate protein names: Membrane Associated GTPase; GTPase SAR1 And Related Small G Proteins; GTPase SAR1 And Related Small G Protein
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPV FETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLARE VAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVP RLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKLQSRAQQAQDLIASAARTKAL AVALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAAQLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYG SVALTQAVLAGFSCYAIGESARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP
Sequences:
>Translated_469_residues MARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPV FETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLARE VAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVP RLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKLQSRAQQAQDLIASAARTKAL AVALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAAQLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYG SVALTQAVLAGFSCYAIGESARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP >Mature_468_residues ARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPVF ETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLAREV AQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVPR LVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKLQSRAQQAQDLIASAARTKALA VALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAAQLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYGS VALTQAVLAGFSCYAIGESARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51136; Mature: 51005
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAA CCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRL HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC PPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVE CCCHHCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHH FEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVP HHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC RLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKL HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QSRAQQAQDLIASAARTKALAVALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAA HHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGES HHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHEEHHHH ARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEVIHIAA CCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLQGSRL HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC PPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVE CCCHHCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHH FEALATLREAGKPMLLVFNKIDQYPEADRQAIYDKIRNERVRQLLSPNEIVMVAASPRVP HHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC RLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQVIERKL HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QSRAQQAQDLIASAARTKALAVALNPVTLLDTLGGLALDIALILRLSRLYGWPMSSAGAA HHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QLLQKIVLSMLSLGAGEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGES HHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHEEHHHH ARHYLAQGASWGPEGPKAAIAQILADLDEASITARLREEIRHKIGFAFP HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA