The gene/protein map for NC_007775 is currently unavailable.
Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605280

Identifier: 86605280

GI number: 86605280

Start: 578157

End: 578693

Strand: Reverse

Name: 86605280

Synonym: CYA_0564

Alternate gene names: NA

Gene position: 578693-578157 (Counterclockwise)

Preceding gene: 86605281

Following gene: 86605279

Centisome position: 19.73

GC content: 62.01

Gene sequence:

>537_bases
ATGTCTGGATGGATCGAGAAAGAGGCGATGCAGGAAGCACTTTGTGGCAGCGGGAGAGAGTCTTTGTGGACCTCAGCGCT
GGCGGCGCGGGAGCGGGAGATCCAGCTTTTGCGGGAGCGCAACCGCCTGCTGCAGAGCCAGATCGACCTGTTGGAGCTGC
GCCAAGAAAAGCAACAGCGGCAAATTCGCAGCTACGAGGCCGAGATCGAGCAGCTCTACCAAGAAAAGCAGGTGTTGGAG
CAGATGCTCCAGGAGCTGCCGGAGCTCTACCGGCGCAAACTTCAGGCCCGCCTGCAGCCCATCCGCGAGCGCATCGCCGC
CATGCAGGCAGAAAATCGCCGGCTCAAGAGGGAACTGTACCAGCTCAGCTACCGGCTGCAGCACGTGGATCAACTGGATG
CCCCCGGCTGGAAGGTGCAATTGCCGCAGATCCCTCCGCTGCGCCGCCGGGATCCCAAAGCTCTGCCCGCCCAGGGAGCG
ACATCTCCTCCCAGGCCCAGTATCGCTCTTGAGGGACAAAGGGAGAAGCCAGAATAG

Upstream 100 bases:

>100_bases
AGGCAAGCCCTGGGGGCTCACCCCAGAGAAGGAGGGGCCATTTGCCCCACCCCGCCGAGCCGGATAGAGTGACGGGGGAG
GGATCCCTTTCTTTGCAGCT

Downstream 100 bases:

>100_bases
GGGAGCCCCCCTGGGATGCCTCAGCATTGCCCAGCAAGAGCGGTTTCGGCGGGGGCGCGCTTGCAAGGCGACTGGAGAGC
TCGAAAAAATGGCCGTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQRQIRSYEAEIEQLYQEKQVLE
QMLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELYQLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGA
TSPPRPSIALEGQREKPE

Sequences:

>Translated_178_residues
MSGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQRQIRSYEAEIEQLYQEKQVLE
QMLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELYQLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGA
TSPPRPSIALEGQREKPE
>Mature_177_residues
SGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQRQIRSYEAEIEQLYQEKQVLEQ
MLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELYQLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGAT
SPPRPSIALEGQREKPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21070; Mature: 20938

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQR
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIRSYEAEIEQLYQEKQVLEQMLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGATSPPRPSIALEGQREKPE
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
SGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQR
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIRSYEAEIEQLYQEKQVLEQMLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGATSPPRPSIALEGQREKPE
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA