| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is speB1 [H]
Identifier: 86605252
GI number: 86605252
Start: 550816
End: 551700
Strand: Reverse
Name: speB1 [H]
Synonym: CYA_0535
Alternate gene names: 86605252
Gene position: 551700-550816 (Counterclockwise)
Preceding gene: 86605254
Following gene: 86605251
Centisome position: 18.81
GC content: 64.07
Gene sequence:
>885_bases ATGGCCCAGTGGTCCCTCCATCCCAGTTCCCAGTCCAACGCCAGGGTTGTCCTCATTCCCACTGCCTTTGGCCCAGATAC GCAGGCGCCGCTGGCCATCCTCAACGCCGGTGCTGAGCTGTGTGCTTTTGAGCCGCGGTTGGGGATCAATGTGGATGAGA TAGCAGTGGCGCAGTTGCCGGGGCTGGTGGATGAGCCGCCCTATGGCATGTGTGAGGCGGCGGTTATTCAGGCTTGGCGA CGACAACAGTGGCCGGTGCTGTTGCCTTCGGTCTTGGCGGCCAGTTGGGGAGCCATTCGTGCCCTTTGGAAGCACTACCT CGCCCTGAGTGTGGTGCATTGCAGCGCCCATGCCAACCTGATGCCGCCCGAGGAGATGACCCAGCCGGAGCAAGATATGG GCTATGGCAACGCTGCCTGGGTGGAGTTGCTCTACCAGCATAGGCTGCCGGTGGTGCATGTGGGGCTGCGCAGCGGCAGT GCCCGCGCCTACGCCTGGCTGAAAAACCACGCCAGCCCGATCTTTTGGGCCCAGGATGGCTGGGATCCGCAGCAGGTGGT GGAGGCTTTGCCGGAGCAGCCGGTGTTTTTGGTGGTGGACTGCAGTGTGCTGGATCCCTCTTTGGCGCCGGCGGTGCACC ACCCGGAGCCGGGGGGGCTGAGTTGGTTTCAACTGTTAACAACCTGTGAGGCCATCTTCGCCGCCCGCCCTGTGATCGGC CTTTCCTTGGGAGGAGTGGCGGTGGGAGCGGCGACGCGGCCAACCGCCCGCGTGGTGGCCCGCCTGCTCAATTGGCTGCT GGCCTGCTACGGCCTCTACTCCCTGAAGCTGGCCCCCAACCCCGCTACGCTCGAACGGCCCGAAAATAGATCGCGAACCT CTTGA
Upstream 100 bases:
>100_bases GTAGCAGATCCAGCTCTGGCGCGGGCGGATCCCGGCTTACTCTCTGAGCCACCATAGAAGCAGGCGGCAGAGCCCCACGT TTGCAACAGGAACGACGCCC
Downstream 100 bases:
>100_bases GCCCGGCTTATGAAGGCTTTCTACCGGCAGGTGCTTTTTCCGAGGTTGCTGGATTGGGCTCTGGCCAGCGAGCGTCTGGA GAGCTATCGGCGGCAGCTTC
Product: arginase family protein
Products: NA
Alternate protein names: Agmatine ureohydrolase 1; AUH 1 [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAQWSLHPSSQSNARVVLIPTAFGPDTQAPLAILNAGAELCAFEPRLGINVDEIAVAQLPGLVDEPPYGMCEAAVIQAWR RQQWPVLLPSVLAASWGAIRALWKHYLALSVVHCSAHANLMPPEEMTQPEQDMGYGNAAWVELLYQHRLPVVHVGLRSGS ARAYAWLKNHASPIFWAQDGWDPQQVVEALPEQPVFLVVDCSVLDPSLAPAVHHPEPGGLSWFQLLTTCEAIFAARPVIG LSLGGVAVGAATRPTARVVARLLNWLLACYGLYSLKLAPNPATLERPENRSRTS
Sequences:
>Translated_294_residues MAQWSLHPSSQSNARVVLIPTAFGPDTQAPLAILNAGAELCAFEPRLGINVDEIAVAQLPGLVDEPPYGMCEAAVIQAWR RQQWPVLLPSVLAASWGAIRALWKHYLALSVVHCSAHANLMPPEEMTQPEQDMGYGNAAWVELLYQHRLPVVHVGLRSGS ARAYAWLKNHASPIFWAQDGWDPQQVVEALPEQPVFLVVDCSVLDPSLAPAVHHPEPGGLSWFQLLTTCEAIFAARPVIG LSLGGVAVGAATRPTARVVARLLNWLLACYGLYSLKLAPNPATLERPENRSRTS >Mature_293_residues AQWSLHPSSQSNARVVLIPTAFGPDTQAPLAILNAGAELCAFEPRLGINVDEIAVAQLPGLVDEPPYGMCEAAVIQAWRR QQWPVLLPSVLAASWGAIRALWKHYLALSVVHCSAHANLMPPEEMTQPEQDMGYGNAAWVELLYQHRLPVVHVGLRSGSA RAYAWLKNHASPIFWAQDGWDPQQVVEALPEQPVFLVVDCSVLDPSLAPAVHHPEPGGLSWFQLLTTCEAIFAARPVIGL SLGGVAVGAATRPTARVVARLLNWLLACYGLYSLKLAPNPATLERPENRSRTS
Specific function: Unknown
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family. Agmatinase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005925 - InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.11 [H]
Molecular weight: Translated: 31958; Mature: 31827
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQWSLHPSSQSNARVVLIPTAFGPDTQAPLAILNAGAELCAFEPRLGINVDEIAVAQLP CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCHHHEEECCCCCCCHHHHHHHHCC GLVDEPPYGMCEAAVIQAWRRQQWPVLLPSVLAASWGAIRALWKHYLALSVVHCSAHANL CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MPPEEMTQPEQDMGYGNAAWVELLYQHRLPVVHVGLRSGSARAYAWLKNHASPIFWAQDG CCHHHHCCCHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCC WDPQQVVEALPEQPVFLVVDCSVLDPSLAPAVHHPEPGGLSWFQLLTTCEAIFAARPVIG CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHE LSLGGVAVGAATRPTARVVARLLNWLLACYGLYSLKLAPNPATLERPENRSRTS EEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure AQWSLHPSSQSNARVVLIPTAFGPDTQAPLAILNAGAELCAFEPRLGINVDEIAVAQLP CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCHHHEEECCCCCCCHHHHHHHHCC GLVDEPPYGMCEAAVIQAWRRQQWPVLLPSVLAASWGAIRALWKHYLALSVVHCSAHANL CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MPPEEMTQPEQDMGYGNAAWVELLYQHRLPVVHVGLRSGSARAYAWLKNHASPIFWAQDG CCHHHHCCCHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCC WDPQQVVEALPEQPVFLVVDCSVLDPSLAPAVHHPEPGGLSWFQLLTTCEAIFAARPVIG CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHE LSLGGVAVGAATRPTARVVARLLNWLLACYGLYSLKLAPNPATLERPENRSRTS EEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]