Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605219

Identifier: 86605219

GI number: 86605219

Start: 518175

End: 519785

Strand: Reverse

Name: 86605219

Synonym: CYA_0502

Alternate gene names: NA

Gene position: 519785-518175 (Counterclockwise)

Preceding gene: 86605220

Following gene: 86605217

Centisome position: 17.72

GC content: 64.49

Gene sequence:

>1611_bases
ATGGGCTTTTTTGTCGGCCAGATCCTGGGCCGGCTGGGAATGCCGCCGCTAGTGGGGATGATCCTGGTCGGGATCCTGTT
GCAAGAGGTCTTGTCCCCAGAGCTGTTGGCGGCAGCCGGGGATCTGCGCTTGGTGGCCGTCACGATTATCCTGATGAAGG
CCGGGCTGGGGCTGGATCGGGAAAAGCTGGCCCAGCAGGGATCCGTGGCGCTGCGGCTGGGGTTTTTGCCGGCAGCCTGT
GAGGCGCTGGCGGTGGCGCTCTTGAGCCGCTGGATCCTGGGGTTGGACTGGGCGACGGGGCTGCTTTTGGGCTGTGTAAT
CGGGGCGGAGTCGCCGGCGGTGATCGTGCCGGGGATGTTGCGCCTCAAGAGCTTGGGCTGGGGGGTGGCCAAAGGGATCC
CGGACGCCATTTTGACCGGCAGCGCCCTTTCCGACGTGCTGCTGCTGTTGGGCTTTAGCCTGTTGCTGAGCTTTTTGGGG
CAGGGATCTCCAGAGGGCCTTCGCCTGTTCGGCCTGGAGCTGTCGCCGCTGCAGTGGCTGCCGTTCCAGGTGGGGATGGA
GATCCTGCTGGGGGTGGTCATCGGCTACCTGGGGGCGCGGCTTTTGGTGGCGCTCCTGGTGCAGCAGAACTGGACGCGCA
ACAGCACGCAAGAGGTGTTGCTGGCAGCCTGCCTGGCGCTGGGCCTGGTGTTGGCGTCGCAGGTGTGGCCCTATTTTTCC
GGCTACCCGGCGGTGATGGCCCTGGGGTTTTTTCTCGTCCAACTGGATGGGCCGCTGGCGCGGCGGCTGCGGCTTGGGTT
CGACGCCCTCTGGACGGTGGCGGAGATCGTGCTGTTTGTCCTGCTGGGGGCCTCTTTGGATCTGCAGGTACTGGGATCCC
TGCTCTTGCCCGGCTTGCTGCTTTTGACCCTGAGCCTGCTGTTGGGCCGGGGCCTGGGCTGGTGGCTTTCCACGGTAGGG
AGCAACTGGAACTGGCGGGAGCGGCTCTTTTTGCTGCCGGGCAACATGGCCAAGGCCACGGTGCAGGCGGCCATCGGCGG
CATCCCCTTGGCCCAAGGGATCCCTGGCGGAGAGACCATCCTGGCCATAGCGGCCTTGTCGATTCTGGCCACAGCACCCC
TAGGGGCTTGGCTGACCCAGGTCTTTGCCCCTCGCCTGCTGGAAAAAGGGGAGGTGGATCCCACCAAGGTGGGCAGCCAG
GGCAAGGTGAGCTTCTTGGCAGCCGTCGATACTTCTCCCTTGGCCGAGGCAGTGCTGCGCAAGGCAGCGGATCTGGCGCG
GCGGCTGGACGGGGAAGTGATTGTGCTCCATGTTACCGACGAGCCGCAGGGGAAGAGAGTAGAACAGTTGCGGCAGCTGG
CCCAGCGCCTCTTGGCCGACATTCGCCACGAATTTTGCCTGGCCTCCGGGCCTTTGGCAGAGACCATCGTGGGCCTAGCC
CAGGAGCGTCAGGTTACCGATATAGTCATGGGCAAGCGGGGCCAGCGGGGCTGGGAGCAAGTATTGCTGGGATCCACTTC
GCAAGCGGTGTTGGAGACCAGCCCCATCCCGGTGATTTTGGTGGAAGAAGAGGAGTTCGGGAAAGCCAGAATTGACACTC
CCACCGCCTAA

Upstream 100 bases:

>100_bases
GAAACGCGAACGGCTTTTTCTCCCTGGGCTGCCCTTCAACACGCGGACGGCGAGGAGAGAGGTTTTGTTGATGCTGGGCA
GTTGGCTGTGGATCTTGGGG

Downstream 100 bases:

>100_bases
AGGCGGGGGATTCTTACGCAGTCCACAAAAGAACCCGTAACGGCGTTGTCAAAGCGCCTCTAGACAGTTCCTTCACGCAA
AGCCCCAAGGTTCTGCTGAC

Product: transporter, monovalent cation:proton antiporter-2 (CPA2) family/universal stress family protein

Products: NA

Alternate protein names: Na(+)/H(+) Antiporter; Transporter CPA2 Family; Sodium/Proton Antiporter CPA1 Family; Na+/H+-Exchanging Protein; Na+/H+ Antiporter; Sodium/Hydrogen Antiporter; Sodium/Hydrogen Exchanger Family Protein; Transporter Monovalent CationProton Antiporter-2 Family; Na+/H+-Exchanging ProteinNa+/H+ Antiporter; Sodium/Hydrogen Exchanger/Universal Stress Family Protein; Monovalent CationProton Antiporter-2 Family Protein

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MGFFVGQILGRLGMPPLVGMILVGILLQEVLSPELLAAAGDLRLVAVTIILMKAGLGLDREKLAQQGSVALRLGFLPAAC
EALAVALLSRWILGLDWATGLLLGCVIGAESPAVIVPGMLRLKSLGWGVAKGIPDAILTGSALSDVLLLLGFSLLLSFLG
QGSPEGLRLFGLELSPLQWLPFQVGMEILLGVVIGYLGARLLVALLVQQNWTRNSTQEVLLAACLALGLVLASQVWPYFS
GYPAVMALGFFLVQLDGPLARRLRLGFDALWTVAEIVLFVLLGASLDLQVLGSLLLPGLLLLTLSLLLGRGLGWWLSTVG
SNWNWRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGETILAIAALSILATAPLGAWLTQVFAPRLLEKGEVDPTKVGSQ
GKVSFLAAVDTSPLAEAVLRKAADLARRLDGEVIVLHVTDEPQGKRVEQLRQLAQRLLADIRHEFCLASGPLAETIVGLA
QERQVTDIVMGKRGQRGWEQVLLGSTSQAVLETSPIPVILVEEEEFGKARIDTPTA

Sequences:

>Translated_536_residues
MGFFVGQILGRLGMPPLVGMILVGILLQEVLSPELLAAAGDLRLVAVTIILMKAGLGLDREKLAQQGSVALRLGFLPAAC
EALAVALLSRWILGLDWATGLLLGCVIGAESPAVIVPGMLRLKSLGWGVAKGIPDAILTGSALSDVLLLLGFSLLLSFLG
QGSPEGLRLFGLELSPLQWLPFQVGMEILLGVVIGYLGARLLVALLVQQNWTRNSTQEVLLAACLALGLVLASQVWPYFS
GYPAVMALGFFLVQLDGPLARRLRLGFDALWTVAEIVLFVLLGASLDLQVLGSLLLPGLLLLTLSLLLGRGLGWWLSTVG
SNWNWRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGETILAIAALSILATAPLGAWLTQVFAPRLLEKGEVDPTKVGSQ
GKVSFLAAVDTSPLAEAVLRKAADLARRLDGEVIVLHVTDEPQGKRVEQLRQLAQRLLADIRHEFCLASGPLAETIVGLA
QERQVTDIVMGKRGQRGWEQVLLGSTSQAVLETSPIPVILVEEEEFGKARIDTPTA
>Mature_535_residues
GFFVGQILGRLGMPPLVGMILVGILLQEVLSPELLAAAGDLRLVAVTIILMKAGLGLDREKLAQQGSVALRLGFLPAACE
ALAVALLSRWILGLDWATGLLLGCVIGAESPAVIVPGMLRLKSLGWGVAKGIPDAILTGSALSDVLLLLGFSLLLSFLGQ
GSPEGLRLFGLELSPLQWLPFQVGMEILLGVVIGYLGARLLVALLVQQNWTRNSTQEVLLAACLALGLVLASQVWPYFSG
YPAVMALGFFLVQLDGPLARRLRLGFDALWTVAEIVLFVLLGASLDLQVLGSLLLPGLLLLTLSLLLGRGLGWWLSTVGS
NWNWRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGETILAIAALSILATAPLGAWLTQVFAPRLLEKGEVDPTKVGSQG
KVSFLAAVDTSPLAEAVLRKAADLARRLDGEVIVLHVTDEPQGKRVEQLRQLAQRLLADIRHEFCLASGPLAETIVGLAQ
ERQVTDIVMGKRGQRGWEQVLLGSTSQAVLETSPIPVILVEEEEFGKARIDTPTA

Specific function: Unknown

COG id: COG0025

COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI47271479, Length=384, Percent_Identity=31.5104166666667, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI66793392, Length=368, Percent_Identity=30.4347826086957, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI154937338, Length=303, Percent_Identity=30.3630363036304, Blast_Score=110, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17567635, Length=414, Percent_Identity=22.463768115942, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI32566724, Length=170, Percent_Identity=25.8823529411765, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI45550940, Length=419, Percent_Identity=28.8782816229117, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI20129297, Length=417, Percent_Identity=29.0167865707434, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24649169, Length=432, Percent_Identity=29.6296296296296, Blast_Score=99, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56933; Mature: 56802

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFVGQILGRLGMPPLVGMILVGILLQEVLSPELLAAAGDLRLVAVTIILMKAGLGLDR
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHCCCCCH
EKLAQQGSVALRLGFLPAACEALAVALLSRWILGLDWATGLLLGCVIGAESPAVIVPGML
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHH
RLKSLGWGVAKGIPDAILTGSALSDVLLLLGFSLLLSFLGQGSPEGLRLFGLELSPLQWL
HHHHCCCHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHC
PFQVGMEILLGVVIGYLGARLLVALLVQQNWTRNSTQEVLLAACLALGLVLASQVWPYFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHC
GYPAVMALGFFLVQLDGPLARRLRLGFDALWTVAEIVLFVLLGASLDLQVLGSLLLPGLL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LLTLSLLLGRGLGWWLSTVGSNWNWRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGETI
HHHHHHHHHCCHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHHCCCCHHCCCCCCHHH
LAIAALSILATAPLGAWLTQVFAPRLLEKGEVDPTKVGSQGKVSFLAAVDTSPLAEAVLR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHH
KAADLARRLDGEVIVLHVTDEPQGKRVEQLRQLAQRLLADIRHEFCLASGPLAETIVGLA
HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QERQVTDIVMGKRGQRGWEQVLLGSTSQAVLETSPIPVILVEEEEFGKARIDTPTA
HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
GFFVGQILGRLGMPPLVGMILVGILLQEVLSPELLAAAGDLRLVAVTIILMKAGLGLDR
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHCCCCCH
EKLAQQGSVALRLGFLPAACEALAVALLSRWILGLDWATGLLLGCVIGAESPAVIVPGML
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHH
RLKSLGWGVAKGIPDAILTGSALSDVLLLLGFSLLLSFLGQGSPEGLRLFGLELSPLQWL
HHHHCCCHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHC
PFQVGMEILLGVVIGYLGARLLVALLVQQNWTRNSTQEVLLAACLALGLVLASQVWPYFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHC
GYPAVMALGFFLVQLDGPLARRLRLGFDALWTVAEIVLFVLLGASLDLQVLGSLLLPGLL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LLTLSLLLGRGLGWWLSTVGSNWNWRERLFLLPGNMAKATVQAAIGGIPLAQGIPGGETI
HHHHHHHHHCCHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHHCCCCHHCCCCCCHHH
LAIAALSILATAPLGAWLTQVFAPRLLEKGEVDPTKVGSQGKVSFLAAVDTSPLAEAVLR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHH
KAADLARRLDGEVIVLHVTDEPQGKRVEQLRQLAQRLLADIRHEFCLASGPLAETIVGLA
HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QERQVTDIVMGKRGQRGWEQVLLGSTSQAVLETSPIPVILVEEEEFGKARIDTPTA
HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA