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The map label for this gene is glf [C]

Identifier: 86605217

GI number: 86605217

Start: 514185

End: 515624

Strand: Reverse

Name: glf [C]

Synonym: CYA_0499

Alternate gene names: 86605217

Gene position: 515624-514185 (Counterclockwise)

Preceding gene: 86605219

Following gene: 86605216

Centisome position: 17.58

GC content: 54.93

Gene sequence:

>1440_bases
ATGCGGGATCCCATCTACATTCTGGGAGCAGGGCCGGCGGGCATGGCGGCTGCCTACCGCTTGACCCAACTGGGCTTCCC
TGTGGTGGTAGTGGAACGGGAAGACAGGGTTGGGGGCTTGGCCAAAAGCATTTGCTACCGGGGGTTCATTCTCGACTATG
GCCCGCACCGCTTTTTTACCAAGATCCCAGCGGTGCTGGAGCTGTGGAACCAGGTTTTGGGATCCGAACAAGTGACTGTC
CGGCGGCTTACCCGCATCTACTACCGCAAGCACTATTTTCAGTACCCCATTCAAGCCTGGGAAGTCCTGCGCAAAGTGGG
GTGGTGGGAAAGCCTGCTCATTGTTCTTTCCTACCTCTGGGCCCAACTTATCCCGCACCCAGCTCCCCAGAACTTTGCCG
ACTGGGTCAAGGGAAAATTTGGTAGCCGGCTTTTTCAGATGTTCTTCAAGAGCTACACGGAAAAGCTCTGGGGGATCCCT
TGTACCGAAATCAGCGCCGATTGGGCTGCCCAGCGCATCAAAGGTCTCAGCCTTGGGCAAGCCATCCGCAAGGCCTTGGG
CTGGAAGCGCGGTTCGGTCAAATCCCTGATCGACCAGTTTCAGTTTCCCCGCCTGGGATCCGGACAGCTCTACGAAAAAA
TGCAGGAGTTTTTGCTGGCTGAGGGTCAAAAGGTTTGGCTAAATACAGAAGTCATCGCCCTTAGACATCAGGGATCCCGG
ATTGTCGAGCTGCAATTGCGCCATCTCCAGGATGGAAGGGAAACTTGGGTCTCCCCCTCCCACGTCATTTCTTCCATCCC
TTTGACAGTGTTGGTGCAGAGCCTGCGGGAACTGCCTCCCCCCCAAGTGCTGCAGGCAGCTCGCAAGCTCAAGTTTCGCA
ACACCGTTTTGGTTTACTTGATTGTGCAGGGATCCCAGCTTTTCCCCGATAACTGGCTGTATATCAATGAACCAACAGTA
CAAGTTGGTCGGGTAACCAATTTTGCCAATTGGTCGCCGGCTATGCTCCCCAACCGAGAACAAACCCCCTTGTGCTGTGA
GTATTGGTGCAACTTTGAGGATCCCTTGTGGCAAGCCCCTGAGGAGGAATTGCTGGCTTTGGCTGAGAGGGAGCTGCGCC
AAATTGGCCTGCTCCAGGATCAGAAGATCTGCGGTGGCTTTGTGGTGCGCCTGCCCCGCACCTATCCCATCTACGCCGGC
AGCTACAAAGAAGACTTGGCCATTTTGCAGAGGTATCTTGGCGAGTTTGAAAATCTGCAACTGGTAGGCCGCTACGGCTC
GTTTAAGTATAACAACCAAGATCACAGTTTGCTGATGGGCCTGCTGGCTGCTGAGAACATTCTCCAACCCGGCAGCCACG
ATCTCTGGCAGGTGAACTCCGATGACGATTACCAAGAGGAGATTAAAGTGCCATCCCCACCCGCAAAGGTGCGACAATGA

Upstream 100 bases:

>100_bases
AGCACAGGCCAGCCTCCAGCCGCAGCCTCCTCTGCCTATTTTCCCAGGGTTTTGCAGGTACTACAATGTCGGCAAGGCTT
GAAGGCGAGCGCAAGGCCAG

Downstream 100 bases:

>100_bases
GCTTCCCTCCTAGCCACCTCTTGCAGCACAGCCGGCAGCATCTGGTCTCTTTTGCCGTCCAAGTTTTGCTTCCCGCTGTG
GCTTTGACGCTGCTGCAGAT

Product: hypothetical protein

Products: UDP-D-galacto-1,4-furanose [C]

Alternate protein names: Amine Oxidase Flavin-Containing; FAD Dependent Oxidoreductase; UDP-Galactopyranose Mutase; Amine Oxidase Flavin-Containing Superfamily; Flavin Containing Amine Oxidoreductase; Protoporphyrinogen Oxidase-Like Protein; LOW QUALITY PROTEIN Protoporphyrinogen Oxidase; Oxidoreductase; Glycosyl Transferase Family 2 Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Teichuronic Acid Biosynthesis Glycosyltransferase TuaH; Flavin-Containing Amine Oxidoreductase Family Protein; Oxidase

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MRDPIYILGAGPAGMAAAYRLTQLGFPVVVVEREDRVGGLAKSICYRGFILDYGPHRFFTKIPAVLELWNQVLGSEQVTV
RRLTRIYYRKHYFQYPIQAWEVLRKVGWWESLLIVLSYLWAQLIPHPAPQNFADWVKGKFGSRLFQMFFKSYTEKLWGIP
CTEISADWAAQRIKGLSLGQAIRKALGWKRGSVKSLIDQFQFPRLGSGQLYEKMQEFLLAEGQKVWLNTEVIALRHQGSR
IVELQLRHLQDGRETWVSPSHVISSIPLTVLVQSLRELPPPQVLQAARKLKFRNTVLVYLIVQGSQLFPDNWLYINEPTV
QVGRVTNFANWSPAMLPNREQTPLCCEYWCNFEDPLWQAPEEELLALAERELRQIGLLQDQKICGGFVVRLPRTYPIYAG
SYKEDLAILQRYLGEFENLQLVGRYGSFKYNNQDHSLLMGLLAAENILQPGSHDLWQVNSDDDYQEEIKVPSPPAKVRQ

Sequences:

>Translated_479_residues
MRDPIYILGAGPAGMAAAYRLTQLGFPVVVVEREDRVGGLAKSICYRGFILDYGPHRFFTKIPAVLELWNQVLGSEQVTV
RRLTRIYYRKHYFQYPIQAWEVLRKVGWWESLLIVLSYLWAQLIPHPAPQNFADWVKGKFGSRLFQMFFKSYTEKLWGIP
CTEISADWAAQRIKGLSLGQAIRKALGWKRGSVKSLIDQFQFPRLGSGQLYEKMQEFLLAEGQKVWLNTEVIALRHQGSR
IVELQLRHLQDGRETWVSPSHVISSIPLTVLVQSLRELPPPQVLQAARKLKFRNTVLVYLIVQGSQLFPDNWLYINEPTV
QVGRVTNFANWSPAMLPNREQTPLCCEYWCNFEDPLWQAPEEELLALAERELRQIGLLQDQKICGGFVVRLPRTYPIYAG
SYKEDLAILQRYLGEFENLQLVGRYGSFKYNNQDHSLLMGLLAAENILQPGSHDLWQVNSDDDYQEEIKVPSPPAKVRQ
>Mature_479_residues
MRDPIYILGAGPAGMAAAYRLTQLGFPVVVVEREDRVGGLAKSICYRGFILDYGPHRFFTKIPAVLELWNQVLGSEQVTV
RRLTRIYYRKHYFQYPIQAWEVLRKVGWWESLLIVLSYLWAQLIPHPAPQNFADWVKGKFGSRLFQMFFKSYTEKLWGIP
CTEISADWAAQRIKGLSLGQAIRKALGWKRGSVKSLIDQFQFPRLGSGQLYEKMQEFLLAEGQKVWLNTEVIALRHQGSR
IVELQLRHLQDGRETWVSPSHVISSIPLTVLVQSLRELPPPQVLQAARKLKFRNTVLVYLIVQGSQLFPDNWLYINEPTV
QVGRVTNFANWSPAMLPNREQTPLCCEYWCNFEDPLWQAPEEELLALAERELRQIGLLQDQKICGGFVVRLPRTYPIYAG
SYKEDLAILQRYLGEFENLQLVGRYGSFKYNNQDHSLLMGLLAAENILQPGSHDLWQVNSDDDYQEEIKVPSPPAKVRQ

Specific function: Involved In The Conversion Of UDP-Galp Into UDP-Galf Through A 2-Keto Intermediate. [C]

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71990307, Length=474, Percent_Identity=25.7383966244726, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.99.9 [C]

Molecular weight: Translated: 55240; Mature: 55240

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPIYILGAGPAGMAAAYRLTQLGFPVVVVEREDRVGGLAKSICYRGFILDYGPHRFFT
CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCHHCCCCCHHHHH
KIPAVLELWNQVLGSEQVTVRRLTRIYYRKHYFQYPIQAWEVLRKVGWWESLLIVLSYLW
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHH
AQLIPHPAPQNFADWVKGKFGSRLFQMFFKSYTEKLWGIPCTEISADWAAQRIKGLSLGQ
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
AIRKALGWKRGSVKSLIDQFQFPRLGSGQLYEKMQEFLLAEGQKVWLNTEVIALRHQGSR
HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCE
IVELQLRHLQDGRETWVSPSHVISSIPLTVLVQSLRELPPPQVLQAARKLKFRNTVLVYL
EEHHHHHHHHCCHHHCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEE
IVQGSQLFPDNWLYINEPTVQVGRVTNFANWSPAMLPNREQTPLCCEYWCNFEDPLWQAP
EECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
EEELLALAERELRQIGLLQDQKICGGFVVRLPRTYPIYAGSYKEDLAILQRYLGEFENLQ
HHHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCCEECCCCHHHHHHHHHHHCCHHCEE
LVGRYGSFKYNNQDHSLLMGLLAAENILQPGSHDLWQVNSDDDYQEEIKVPSPPAKVRQ
EEECCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHCCCCCCCHHCCC
>Mature Secondary Structure
MRDPIYILGAGPAGMAAAYRLTQLGFPVVVVEREDRVGGLAKSICYRGFILDYGPHRFFT
CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCHHCCCCCHHHHH
KIPAVLELWNQVLGSEQVTVRRLTRIYYRKHYFQYPIQAWEVLRKVGWWESLLIVLSYLW
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHH
AQLIPHPAPQNFADWVKGKFGSRLFQMFFKSYTEKLWGIPCTEISADWAAQRIKGLSLGQ
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
AIRKALGWKRGSVKSLIDQFQFPRLGSGQLYEKMQEFLLAEGQKVWLNTEVIALRHQGSR
HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCE
IVELQLRHLQDGRETWVSPSHVISSIPLTVLVQSLRELPPPQVLQAARKLKFRNTVLVYL
EEHHHHHHHHCCHHHCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEE
IVQGSQLFPDNWLYINEPTVQVGRVTNFANWSPAMLPNREQTPLCCEYWCNFEDPLWQAP
EECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
EEELLALAERELRQIGLLQDQKICGGFVVRLPRTYPIYAGSYKEDLAILQRYLGEFENLQ
HHHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCCEECCCCHHHHHHHHHHHCCHHCEE
LVGRYGSFKYNNQDHSLLMGLLAAENILQPGSHDLWQVNSDDDYQEEIKVPSPPAKVRQ
EEECCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDPgalactose [C]

Specific reaction: UDPgalactose --> UDP-D-galacto-1,4-furanose [C]

General reaction: Group transfer (intramolecular Isomerization) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA