Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605212

Identifier: 86605212

GI number: 86605212

Start: 509831

End: 510205

Strand: Reverse

Name: 86605212

Synonym: CYA_0494

Alternate gene names: NA

Gene position: 510205-509831 (Counterclockwise)

Preceding gene: 86605213

Following gene: 86605210

Centisome position: 17.4

GC content: 63.47

Gene sequence:

>375_bases
GTGGCAACATCGGAGCCCAAACCTTCCCCAAAACCTGGCTCGCCCCTGCCCCCAGGTCGGGATCCAGCGGCAGATCGGGT
GAGGCTGCTCACGGAACTGGCCGCCCCCTACCGCAGTCTGCGGCGCTTTGTCTACCTGGCGGTGGGTTTTTCGGCCACCA
TCGGGGCATTTGTATTTTTCTTTCGAGCCTTGGCAGGGCGGGATCTGGAGACCACCCTGCCCAGCTTGGCCTTACAGTTA
GGGATCCTGGCCGGCGCCCTCGGCCTCAACAGGCTGGAAAGCCACTCCCAGCAAAAGCTGGTCAGACGGATGAAGCAGCG
CCTTAGCAGCCAAAAAGACTCGCCCCGTCCGCCCGAGGGCGATGCCCCGCTTTAG

Upstream 100 bases:

>100_bases
GGGAAGAGCAAGATATTCTGGCTGCCTGTCGGGCTGCCGAGGAAAGCTTGGCGGCGATTTCTGGCCGGGATCCCCTACTA
TTGCCCGAGGAGGTGTAGCC

Downstream 100 bases:

>100_bases
GGCAGGGACGGCTAGCCTGTCAATAGTCCCAGTCCCCTTGGCGGGGATCGGAGTCGTCTTCCTCGTCGGCGCTGGGAAGA
TAACGGCGGGCTTCCTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MATSEPKPSPKPGSPLPPGRDPAADRVRLLTELAAPYRSLRRFVYLAVGFSATIGAFVFFFRALAGRDLETTLPSLALQL
GILAGALGLNRLESHSQQKLVRRMKQRLSSQKDSPRPPEGDAPL

Sequences:

>Translated_124_residues
MATSEPKPSPKPGSPLPPGRDPAADRVRLLTELAAPYRSLRRFVYLAVGFSATIGAFVFFFRALAGRDLETTLPSLALQL
GILAGALGLNRLESHSQQKLVRRMKQRLSSQKDSPRPPEGDAPL
>Mature_123_residues
ATSEPKPSPKPGSPLPPGRDPAADRVRLLTELAAPYRSLRRFVYLAVGFSATIGAFVFFFRALAGRDLETTLPSLALQLG
ILAGALGLNRLESHSQQKLVRRMKQRLSSQKDSPRPPEGDAPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13478; Mature: 13347

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSEPKPSPKPGSPLPPGRDPAADRVRLLTELAAPYRSLRRFVYLAVGFSATIGAFVFF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRALAGRDLETTLPSLALQLGILAGALGLNRLESHSQQKLVRRMKQRLSSQKDSPRPPEG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DAPL
CCCC
>Mature Secondary Structure 
ATSEPKPSPKPGSPLPPGRDPAADRVRLLTELAAPYRSLRRFVYLAVGFSATIGAFVFF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRALAGRDLETTLPSLALQLGILAGALGLNRLESHSQQKLVRRMKQRLSSQKDSPRPPEG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DAPL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA