| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605213
Identifier: 86605213
GI number: 86605213
Start: 510208
End: 510849
Strand: Reverse
Name: 86605213
Synonym: CYA_0495
Alternate gene names: NA
Gene position: 510849-510208 (Counterclockwise)
Preceding gene: 86605214
Following gene: 86605212
Centisome position: 17.42
GC content: 61.53
Gene sequence:
>642_bases TTGGGGATTGACCTGCGCAGTTACGTGTTTTTGGATCGGCTCCAGCCCCAGTACGCTGCTTATCTGGGCACGGTGGCCCA GGGCTTTTTGCCTCTGCCAGGGGATACTTCCCTCTGGGTCGAGATTTCCCCCGGCATCGAGATCAACCGCGTTATGGACA TCGCCCTCAAAGCCACCTCGGTAAGGCCGGGGCTGCAGGTGGTGGAGCGCCTCTACGGCCTTTTGGAGGTACACTCCAGC AACCAGGGGGATACCCGCACTGCCGGTCGGGCCATCCTGGCGGCTTTGGGGGTGAGCGAAAAGGAGCGCCTCAGGCCGCG CATCATCTCCAGCCAGATCATTCGCAACATCGATCCCCACCAAACCCAGTTGATCAACCGTTTCCGCCGCGGCCAGATGC TCCTAGCCGGCCAAACCCTCTACATCCTGGAGGTGCAGCCGGCAGGCTATGCCCCCCTGGCCGCCAACGAGGCAGAAAAA TCGGCCCGCATCAACATCCTCGAAGTGATGCCCTTTGGCAGCTTTGGCCGCGTCTACTTGGGCGGGGAAGAGCAAGATAT TCTGGCTGCCTGTCGGGCTGCCGAGGAAAGCTTGGCGGCGATTTCTGGCCGGGATCCCCTACTATTGCCCGAGGAGGTGT AG
Upstream 100 bases:
>100_bases TCCCCAAAAGCCAAGAGATGGCGTGAGACTAGAAAGGGAGGAATGCCGGCCCCGTCGTCCGACGTCCAACCCAGCCCAAC AGACAGGGGGGAGAACTCCT
Downstream 100 bases:
>100_bases CCGTGGCAACATCGGAGCCCAAACCTTCCCCAAAACCTGGCTCGCCCCTGCCCCCAGGTCGGGATCCAGCGGCAGATCGG GTGAGGCTGCTCACGGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MGIDLRSYVFLDRLQPQYAAYLGTVAQGFLPLPGDTSLWVEISPGIEINRVMDIALKATSVRPGLQVVERLYGLLEVHSS NQGDTRTAGRAILAALGVSEKERLRPRIISSQIIRNIDPHQTQLINRFRRGQMLLAGQTLYILEVQPAGYAPLAANEAEK SARINILEVMPFGSFGRVYLGGEEQDILAACRAAEESLAAISGRDPLLLPEEV
Sequences:
>Translated_213_residues MGIDLRSYVFLDRLQPQYAAYLGTVAQGFLPLPGDTSLWVEISPGIEINRVMDIALKATSVRPGLQVVERLYGLLEVHSS NQGDTRTAGRAILAALGVSEKERLRPRIISSQIIRNIDPHQTQLINRFRRGQMLLAGQTLYILEVQPAGYAPLAANEAEK SARINILEVMPFGSFGRVYLGGEEQDILAACRAAEESLAAISGRDPLLLPEEV >Mature_212_residues GIDLRSYVFLDRLQPQYAAYLGTVAQGFLPLPGDTSLWVEISPGIEINRVMDIALKATSVRPGLQVVERLYGLLEVHSSN QGDTRTAGRAILAALGVSEKERLRPRIISSQIIRNIDPHQTQLINRFRRGQMLLAGQTLYILEVQPAGYAPLAANEAEKS ARINILEVMPFGSFGRVYLGGEEQDILAACRAAEESLAAISGRDPLLLPEEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23366; Mature: 23235
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIDLRSYVFLDRLQPQYAAYLGTVAQGFLPLPGDTSLWVEISPGIEINRVMDIALKATS CCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHCC VRPGLQVVERLYGLLEVHSSNQGDTRTAGRAILAALGVSEKERLRPRIISSQIIRNIDPH CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH QTQLINRFRRGQMLLAGQTLYILEVQPAGYAPLAANEAEKSARINILEVMPFGSFGRVYL HHHHHHHHHCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE GGEEQDILAACRAAEESLAAISGRDPLLLPEEV CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GIDLRSYVFLDRLQPQYAAYLGTVAQGFLPLPGDTSLWVEISPGIEINRVMDIALKATS CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHCC VRPGLQVVERLYGLLEVHSSNQGDTRTAGRAILAALGVSEKERLRPRIISSQIIRNIDPH CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH QTQLINRFRRGQMLLAGQTLYILEVQPAGYAPLAANEAEKSARINILEVMPFGSFGRVYL HHHHHHHHHCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE GGEEQDILAACRAAEESLAAISGRDPLLLPEEV CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA