| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605158
Identifier: 86605158
GI number: 86605158
Start: 458677
End: 459972
Strand: Reverse
Name: 86605158
Synonym: CYA_0439
Alternate gene names: NA
Gene position: 459972-458677 (Counterclockwise)
Preceding gene: 86605159
Following gene: 86605155
Centisome position: 15.68
GC content: 64.43
Gene sequence:
>1296_bases ATGGCCGGCAGCACGACCGAGTCTTTGCGGCAAGTCTACGAGGAACTGCCCTATCCCAACGTGCCCGTTGAGGCCTCAGG GCGCAACGCCATCGGCAGCCTATACCGCTCAAGCTGGACGACGGCCCAATACGCCCGCACCCGCGCCATCCTGCCCAGCG AGGGGATCGCCATCCTCAATGTCGGCTGTGGCTCCGGCTGGGAGACCTTGATCTTGGCGGAGGCCAACCCGGGGGCACGG CTGGTGGCCTGCGACCTCTCGCCGGAGTCGGTGCGGGCGACGGAGCGACGCCTGCGCTACCACGGCTTCGGAGAGGTGGA GCTGTACGCCCTCGACCTGCTGGAAATTGAACAACTGGGGCAGCAGTTTGACTTCATCAGCCTCAACGACGTGCTCTATT TGCTCGAGGATCCGGTGGCGGGCTTGAAGGCGCTCAAGCGGGTGCTCAAGCCGGACGGCATCCTGCGGGCCAACCTGCAC CACGCCTACCAGCGGCAGGTGATCTTGCGCATGCAGGAGGCGTTCCGGCTGCTGGGGTTGTTTGATCTGCCCACGCCCGA AGCCTGCCGGCGGGTGCGGGAGTTCATGGCCAGCCTGGCCTCTGACGAGCTGCGGGTCTCCCTGCACTGGGATCCCCAGA TCTACAGCGACGACACCAACATCCGCGCCAACTACCTCTTGCCCGGCGACAAGGGGTTTTTAATCCCAGACTTGATGCGT ATGCTCCAGGAGGCGGAGCTGGGCTTGGTTTGCCTGGTGGACTACGCCGACTGGGATCCGGCGCTGCTGTTCAAAGACAG GGCGATGCCGGCCTGGCTGCAGGTGGAGCTGGACAAGCTCTCTCCCGCCGAGCAAAACCACTTCTACGAGCTGATCTACC CCGACCACCGCCTGATCGACTTTTGGGCCGAGCACCCCGGCTCTTCCCTGGTCTTGCCCTGGAGCGACGCCGACTGGCTG GAGGGCAGGGTGCAGCTCAACCCCATCCTGATGGACAATGCCGAATTTCGCCGCAACTTCGCCCAGGCCTACGAAAAGAA GCTGGAGTTTACTATGAACTGGCCGGGGGCCAGCCGCGGCCGCCTCGCCATTCCGGCTCCCCAGATGGCCTGGCTGGGAT CCCTCTTGCAGGGGCCAGTGGCGGTGGCCAGCTTGATCGAGCAGGCGGCCCAAGCCCATCAGATAGAACCGGAAGCGGCC CAGGAGCAGGCGCTCACCTACCTGGCGGGGCTGGAGTCGTTTCTGTTTGTGATGTTGGATCCCAGCCCAGCTTCTCTTGG CGCAGAAGGGGCTTGA
Upstream 100 bases:
>100_bases GTCGGAGAAGTTGGATCGGGGGGGCAATGAGGCCATTGCCGCTGCCATCGCGGCCTTCCTGAGGCAGTAGCATAGGGAGC AGCTTCTTGGAGCGGATCCC
Downstream 100 bases:
>100_bases AATGGCGGCAATCTGGGCCCCGCCTTGGGCGCGCAGGGGAGCGGATCCCTAGCGATCCACCAGGCGCAGCTCAAAGGTGA GGATGTTGGCGGCCAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAGSTTESLRQVYEELPYPNVPVEASGRNAIGSLYRSSWTTAQYARTRAILPSEGIAILNVGCGSGWETLILAEANPGAR LVACDLSPESVRATERRLRYHGFGEVELYALDLLEIEQLGQQFDFISLNDVLYLLEDPVAGLKALKRVLKPDGILRANLH HAYQRQVILRMQEAFRLLGLFDLPTPEACRRVREFMASLASDELRVSLHWDPQIYSDDTNIRANYLLPGDKGFLIPDLMR MLQEAELGLVCLVDYADWDPALLFKDRAMPAWLQVELDKLSPAEQNHFYELIYPDHRLIDFWAEHPGSSLVLPWSDADWL EGRVQLNPILMDNAEFRRNFAQAYEKKLEFTMNWPGASRGRLAIPAPQMAWLGSLLQGPVAVASLIEQAAQAHQIEPEAA QEQALTYLAGLESFLFVMLDPSPASLGAEGA
Sequences:
>Translated_431_residues MAGSTTESLRQVYEELPYPNVPVEASGRNAIGSLYRSSWTTAQYARTRAILPSEGIAILNVGCGSGWETLILAEANPGAR LVACDLSPESVRATERRLRYHGFGEVELYALDLLEIEQLGQQFDFISLNDVLYLLEDPVAGLKALKRVLKPDGILRANLH HAYQRQVILRMQEAFRLLGLFDLPTPEACRRVREFMASLASDELRVSLHWDPQIYSDDTNIRANYLLPGDKGFLIPDLMR MLQEAELGLVCLVDYADWDPALLFKDRAMPAWLQVELDKLSPAEQNHFYELIYPDHRLIDFWAEHPGSSLVLPWSDADWL EGRVQLNPILMDNAEFRRNFAQAYEKKLEFTMNWPGASRGRLAIPAPQMAWLGSLLQGPVAVASLIEQAAQAHQIEPEAA QEQALTYLAGLESFLFVMLDPSPASLGAEGA >Mature_430_residues AGSTTESLRQVYEELPYPNVPVEASGRNAIGSLYRSSWTTAQYARTRAILPSEGIAILNVGCGSGWETLILAEANPGARL VACDLSPESVRATERRLRYHGFGEVELYALDLLEIEQLGQQFDFISLNDVLYLLEDPVAGLKALKRVLKPDGILRANLHH AYQRQVILRMQEAFRLLGLFDLPTPEACRRVREFMASLASDELRVSLHWDPQIYSDDTNIRANYLLPGDKGFLIPDLMRM LQEAELGLVCLVDYADWDPALLFKDRAMPAWLQVELDKLSPAEQNHFYELIYPDHRLIDFWAEHPGSSLVLPWSDADWLE GRVQLNPILMDNAEFRRNFAQAYEKKLEFTMNWPGASRGRLAIPAPQMAWLGSLLQGPVAVASLIEQAAQAHQIEPEAAQ EQALTYLAGLESFLFVMLDPSPASLGAEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2067c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 48321; Mature: 48189
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSTTESLRQVYEELPYPNVPVEASGRNAIGSLYRSSWTTAQYARTRAILPSEGIAILN CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEE VGCGSGWETLILAEANPGARLVACDLSPESVRATERRLRYHGFGEVELYALDLLEIEQLG ECCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHC QQFDFISLNDVLYLLEDPVAGLKALKRVLKPDGILRANLHHAYQRQVILRMQEAFRLLGL CCCCEEEHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC FDLPTPEACRRVREFMASLASDELRVSLHWDPQIYSDDTNIRANYLLPGDKGFLIPDLMR CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCEEEEEECCCCCCCCHHHHHH MLQEAELGLVCLVDYADWDPALLFKDRAMPAWLQVELDKLSPAEQNHFYELIYPDHRLID HHHHCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEEHHCCCCCCCCEEEEECCCCHHHH FWAEHPGSSLVLPWSDADWLEGRVQLNPILMDNAEFRRNFAQAYEKKLEFTMNWPGASRG HHHCCCCCEEEEECCCCHHHCCEEEECEEEECCHHHHHHHHHHHHHHCEEEECCCCCCCC RLAIPAPQMAWLGSLLQGPVAVASLIEQAAQAHQIEPEAAQEQALTYLAGLESFLFVMLD EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEC PSPASLGAEGA CCCCCCCCCCC >Mature Secondary Structure AGSTTESLRQVYEELPYPNVPVEASGRNAIGSLYRSSWTTAQYARTRAILPSEGIAILN CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEE VGCGSGWETLILAEANPGARLVACDLSPESVRATERRLRYHGFGEVELYALDLLEIEQLG ECCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHC QQFDFISLNDVLYLLEDPVAGLKALKRVLKPDGILRANLHHAYQRQVILRMQEAFRLLGL CCCCEEEHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC FDLPTPEACRRVREFMASLASDELRVSLHWDPQIYSDDTNIRANYLLPGDKGFLIPDLMR CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCEEEEEECCCCCCCCHHHHHH MLQEAELGLVCLVDYADWDPALLFKDRAMPAWLQVELDKLSPAEQNHFYELIYPDHRLID HHHHCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEEHHCCCCCCCCEEEEECCCCHHHH FWAEHPGSSLVLPWSDADWLEGRVQLNPILMDNAEFRRNFAQAYEKKLEFTMNWPGASRG HHHCCCCCEEEEECCCCHHHCCEEEECEEEECCHHHHHHHHHHHHHHCEEEECCCCCCCC RLAIPAPQMAWLGSLLQGPVAVASLIEQAAQAHQIEPEAAQEQALTYLAGLESFLFVMLD EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEC PSPASLGAEGA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3041005; 1901865 [H]