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The map label for this gene is rca

Identifier: 86605146

GI number: 86605146

Start: 444839

End: 446062

Strand: Reverse

Name: rca

Synonym: CYA_0427

Alternate gene names: 86605146

Gene position: 446062-444839 (Counterclockwise)

Preceding gene: 86605148

Following gene: 86605145

Centisome position: 15.21

GC content: 62.01

Gene sequence:

>1224_bases
ATGAGCTACTACATCCCCCCCACCTTTCTTAAAGTTGTCGCCCTGCACCTGACCAAAAATCATCTTCCTCTGCCCGACGT
GCCCGTTCCGCTCATCTTGGGCATCCACGGGCGCAAGGGGGAGGGCAAGACCTTCCAATGCAACCTCATCTTTGAGCGCA
TGAAGGTCTATGCCGTCCACATCTCGGGGGGCGAGCTGGAAAGTCCCGACGCCGGGGATCCCGCCCGTATGATTCGCCTG
CGCTACCGTGAAGCTGCCGAGCACATCCGCAAATTTGGCCAGATGGCCGTGCTGATGATCAACGACCTGGATGCCGGCGC
CGGTCGCCTGAACAGCATGACCCAGTACACCGTCAACACCCAACTGGTGAGCGCCACCCTGATGAACATCGCCGACAACC
CCACCAACGTGCAGCTTCCCGGCAGCTACGATCCCAAGCCCCTGCCGCGGGTGCCCATCATCGCCACCGGCAACGACTTT
TCCACCCTCTATGCCCCCCTCATCCGCGATGGGCGCATGCGCAAGTTCTACTGGGAGCCCAGCCGCACCGACCGCATCCA
CATCGTTCACGGCATTTTTCAAGCCGACGGGCTGTCTCTTGAGGAGATTGAGCGCCTGGTGGACGCCTTTCCCGAGCAGG
CCATCGACTTTTTCGGCGCCCTGCGCGCCCAGCTCTACGACGAGCAGGTATGGCAATTTATCCAAGAAGTCGGCCTGGAA
GGGATTGCCTTTCGCCTGCTCAAAAGCAAAGAGGGCGCCCCCCAGTTTCCGCCACCGCGATTTTCTCTGGAGCAGTTGAT
CCAGGCCGGCCACCAGCTCAAAGCCGAGCAACACCAAGTAGAAGCCCGTCGCCTCTCCGAGGAATACCTTGGCCTCCGGC
GCTCCGCTCCTCAAGAGCCGCCCCCCGCTTCCCCGCCATCCCCTCCTCCTGTGGCTGCCAACTCGGCCGATCCTGCCCCA
GTCTCCCTCAACCCAGACGTGCAGGCCCAGCTTCGCCAGATCCTGGCCCAAGGCTATGAGATCCTGGTGGAGCATGCGGA
TCCGCGCCGCTACCGCGTTCATTCCTGGCAGGAGTGTGGAGTTGCCCACCTGAGAGAATGGGCCGCTGCCTGTCAGGCTG
TCGAGCAGTGCCTCAGCCGTTTTCCCAAGGACTACATCCGGCTGGTGGGCGTAGATCCGGTGAAAAAACAACGGCGGGTC
GAGGCCATCATCCACCGCCCCTGA

Upstream 100 bases:

>100_bases
TGTCCCTGCTGCCCGCCGAGAATTGGGCCGAGGAGGGGCAGGGGCCAACTTCCCAGAACGACAATGGAGGAAATAGAAAC
TCTCGCAACCAAGCTCACCG

Downstream 100 bases:

>100_bases
GACTGAACCGGGGCAAAATGGCACAATGAGAGAGCCTCCCCTCTGCCCGACAATCCTCCCTGGATCATGCTGTTTTGAAT
CATGCTGTGGCTGCGTCTTC

Product: ribulose bisphosphate carboxylase/oxygenase activase

Products: NA

Alternate protein names: RA; RuBisCO activase [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSYYIPPTFLKVVALHLTKNHLPLPDVPVPLILGIHGRKGEGKTFQCNLIFERMKVYAVHISGGELESPDAGDPARMIRL
RYREAAEHIRKFGQMAVLMINDLDAGAGRLNSMTQYTVNTQLVSATLMNIADNPTNVQLPGSYDPKPLPRVPIIATGNDF
STLYAPLIRDGRMRKFYWEPSRTDRIHIVHGIFQADGLSLEEIERLVDAFPEQAIDFFGALRAQLYDEQVWQFIQEVGLE
GIAFRLLKSKEGAPQFPPPRFSLEQLIQAGHQLKAEQHQVEARRLSEEYLGLRRSAPQEPPPASPPSPPPVAANSADPAP
VSLNPDVQAQLRQILAQGYEILVEHADPRRYRVHSWQECGVAHLREWAAACQAVEQCLSRFPKDYIRLVGVDPVKKQRRV
EAIIHRP

Sequences:

>Translated_407_residues
MSYYIPPTFLKVVALHLTKNHLPLPDVPVPLILGIHGRKGEGKTFQCNLIFERMKVYAVHISGGELESPDAGDPARMIRL
RYREAAEHIRKFGQMAVLMINDLDAGAGRLNSMTQYTVNTQLVSATLMNIADNPTNVQLPGSYDPKPLPRVPIIATGNDF
STLYAPLIRDGRMRKFYWEPSRTDRIHIVHGIFQADGLSLEEIERLVDAFPEQAIDFFGALRAQLYDEQVWQFIQEVGLE
GIAFRLLKSKEGAPQFPPPRFSLEQLIQAGHQLKAEQHQVEARRLSEEYLGLRRSAPQEPPPASPPSPPPVAANSADPAP
VSLNPDVQAQLRQILAQGYEILVEHADPRRYRVHSWQECGVAHLREWAAACQAVEQCLSRFPKDYIRLVGVDPVKKQRRV
EAIIHRP
>Mature_406_residues
SYYIPPTFLKVVALHLTKNHLPLPDVPVPLILGIHGRKGEGKTFQCNLIFERMKVYAVHISGGELESPDAGDPARMIRLR
YREAAEHIRKFGQMAVLMINDLDAGAGRLNSMTQYTVNTQLVSATLMNIADNPTNVQLPGSYDPKPLPRVPIIATGNDFS
TLYAPLIRDGRMRKFYWEPSRTDRIHIVHGIFQADGLSLEEIERLVDAFPEQAIDFFGALRAQLYDEQVWQFIQEVGLEG
IAFRLLKSKEGAPQFPPPRFSLEQLIQAGHQLKAEQHQVEARRLSEEYLGLRRSAPQEPPPASPPSPPPVAANSADPAPV
SLNPDVQAQLRQILAQGYEILVEHADPRRYRVHSWQECGVAHLREWAAACQAVEQCLSRFPKDYIRLVGVDPVKKQRRVE
AIIHRP

Specific function: Activation of RuBisCO (ribulose-1,5-bisohosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO activase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003959
- InterPro:   IPR000894 [H]

Pfam domain/function: PF00004 AAA; PF00101 RuBisCO_small [H]

EC number: NA

Molecular weight: Translated: 45851; Mature: 45720

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYIPPTFLKVVALHLTKNHLPLPDVPVPLILGIHGRKGEGKTFQCNLIFERMKVYAVH
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEHEEEEEEEEEEEE
ISGGELESPDAGDPARMIRLRYREAAEHIRKFGQMAVLMINDLDAGAGRLNSMTQYTVNT
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHCCHHEEEHHH
QLVSATLMNIADNPTNVQLPGSYDPKPLPRVPIIATGNDFSTLYAPLIRDGRMRKFYWEP
HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEEEECC
SRTDRIHIVHGIFQADGLSLEEIERLVDAFPEQAIDFFGALRAQLYDEQVWQFIQEVGLE
CCCCEEEEEEEEHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GIAFRLLKSKEGAPQFPPPRFSLEQLIQAGHQLKAEQHQVEARRLSEEYLGLRRSAPQEP
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PPASPPSPPPVAANSADPAPVSLNPDVQAQLRQILAQGYEILVEHADPRRYRVHSWQECG
CCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHCC
VAHLREWAAACQAVEQCLSRFPKDYIRLVGVDPVKKQRRVEAIIHRP
HHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYYIPPTFLKVVALHLTKNHLPLPDVPVPLILGIHGRKGEGKTFQCNLIFERMKVYAVH
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEHEEEEEEEEEEEE
ISGGELESPDAGDPARMIRLRYREAAEHIRKFGQMAVLMINDLDAGAGRLNSMTQYTVNT
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHCCHHEEEHHH
QLVSATLMNIADNPTNVQLPGSYDPKPLPRVPIIATGNDFSTLYAPLIRDGRMRKFYWEP
HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEEEECC
SRTDRIHIVHGIFQADGLSLEEIERLVDAFPEQAIDFFGALRAQLYDEQVWQFIQEVGLE
CCCCEEEEEEEEHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GIAFRLLKSKEGAPQFPPPRFSLEQLIQAGHQLKAEQHQVEARRLSEEYLGLRRSAPQEP
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PPASPPSPPPVAANSADPAPVSLNPDVQAQLRQILAQGYEILVEHADPRRYRVHSWQECG
CCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHCC
VAHLREWAAACQAVEQCLSRFPKDYIRLVGVDPVKKQRRVEAIIHRP
HHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8467074 [H]