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The map label for this gene is yjcF [C]

Identifier: 86605137

GI number: 86605137

Start: 437609

End: 438103

Strand: Reverse

Name: yjcF [C]

Synonym: CYA_0418

Alternate gene names: 86605137

Gene position: 438103-437609 (Counterclockwise)

Preceding gene: 86605140

Following gene: 86605135

Centisome position: 14.94

GC content: 64.04

Gene sequence:

>495_bases
ATGGTCGAAACCGCAGCGGAACTGTTGCAGCGCTATGGCAGCGGCGAGCGGGACTTCAGCAACAGCCAATTGGCCGAAGC
TGACCTGGCCGGTGCCGACTTGGCCGGGATCGACCTGGGCGGAGCAACCCTCCAGCAGGCCAAACTGGCCGCTGCCAACC
TGGAGCGGGCCTACTTGAGCGGCGCCGACCTCAGCCAAGCCGATCTGCAGGGATCCAACCTGCGCCTGGCCAATCTAGAA
AAGGCCAAATTGCAGGGATCTCGATTGCAAGGGGCCAACCTGCGCGGCGCCAACCTGACCGCAGCCGACCTGAGTGGTGC
CGATCTCAGCCAGGCAGACCTGGCGGGGGCCAACCTCAGCGGCGCCAACCTGAAAGGGGCCAACCTCAGCGGCTGTAAAC
TCAAGCTTGCCAACCTGCGGGGAGCCTGTTACGACACGGCCACTCACCTAGAAGCAGATGTCGTTCCCGCCGAGTTGGGC
ATGGTTTCCGCCTAG

Upstream 100 bases:

>100_bases
TCTGGAGGCATGGCTGATAGGCGCCGCCTGGAGGATGTGCGCCCTTGGCGGCAACCCTGTTCCTCGGTAGGATCCGACTT
GTCTAGGATGGGGAAAAGCA

Downstream 100 bases:

>100_bases
CCTGCGGCTAGTTGTCCTGAGGCTCCAGATCCAAGATCTCCTGGATCTCGGCATCGGTATAGCCCACCGCCCGCAGCTTC
TCTGCCACCGCCTCGATCTC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MVETAAELLQRYGSGERDFSNSQLAEADLAGADLAGIDLGGATLQQAKLAAANLERAYLSGADLSQADLQGSNLRLANLE
KAKLQGSRLQGANLRGANLTAADLSGADLSQADLAGANLSGANLKGANLSGCKLKLANLRGACYDTATHLEADVVPAELG
MVSA

Sequences:

>Translated_164_residues
MVETAAELLQRYGSGERDFSNSQLAEADLAGADLAGIDLGGATLQQAKLAAANLERAYLSGADLSQADLQGSNLRLANLE
KAKLQGSRLQGANLRGANLTAADLSGADLSQADLAGANLSGANLKGANLSGCKLKLANLRGACYDTATHLEADVVPAELG
MVSA
>Mature_164_residues
MVETAAELLQRYGSGERDFSNSQLAEADLAGADLAGIDLGGATLQQAKLAAANLERAYLSGADLSQADLQGSNLRLANLE
KAKLQGSRLQGANLRGANLTAADLSGADLSQADLAGANLSGANLKGANLSGCKLKLANLRGACYDTATHLEADVVPAELG
MVSA

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=145, Percent_Identity=38.6206896551724, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221377802, Length=135, Percent_Identity=37.037037037037, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 16641; Mature: 16641

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVETAAELLQRYGSGERDFSNSQLAEADLAGADLAGIDLGGATLQQAKLAAANLERAYLS
CCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHC
GADLSQADLQGSNLRLANLEKAKLQGSRLQGANLRGANLTAADLSGADLSQADLAGANLS
CCCCCHHCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCHHCCCCCCC
GANLKGANLSGCKLKLANLRGACYDTATHLEADVVPAELGMVSA
CCCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCHHCCCCCCC
>Mature Secondary Structure
MVETAAELLQRYGSGERDFSNSQLAEADLAGADLAGIDLGGATLQQAKLAAANLERAYLS
CCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHC
GADLSQADLQGSNLRLANLEKAKLQGSRLQGANLRGANLTAADLSGADLSQADLAGANLS
CCCCCHHCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCHHCCCCCCC
GANLKGANLSGCKLKLANLRGACYDTATHLEADVVPAELGMVSA
CCCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA